RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 SLC35B2Q8TB61 432 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 ACTL9Q8TC94 416 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 BPIFB1Q8TDL5 484 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 DEPDC1BQ8WUY9 529 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 OSCP1Q8WVF1 389 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 NKD2Q969F2 451 aaPredicted RBP10.13□□□□□ -0.79
SIN3A-205ENST00000564778 ELSPBP1Q96BH3 223 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 KLC2Q9H0B6 622 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 LRRC19Q9H756 370 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 ZFP14Q9HCL3 533 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 HOMER3Q9NSC5 361 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 DTLQ9NZJ0 730 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 STIM2Q9P246 746 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 R3HDM2Q9Y2K5 976 aaKnown RBP10.13□□□□□ -0.79
SIN3A-205ENST00000564778 NR2E1Q9Y466 385 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 TCF20Q9UGU0 1960 aaKnown RBP10.13□□□□□ -0.79
SIN3A-205ENST00000564778 MUC3AQ02505 3323 aa10.13□□□□□ -0.79
SIN3A-205ENST00000564778 TYW5A2RUC4 315 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CTAGE15A4D2H0 777 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 HEPACAM2A8MVW5 462 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 ANHXE9PGG2 379 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 SCAMP3O14828 347 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 DAPK3O43293 454 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 PHF2O75151 1096 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CLDN11O75508 207 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CNTN5O94779 1100 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CTAGE8P0CG41 777 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 FNTAP49354 379 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 SGSHP51688 502 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 RPS24P62847 133 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 DYNLT1P63172 113 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 OTUD4Q01804 1114 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 GBE1Q04446 702 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 GALNT2Q10471 571 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 XRCC4Q13426 336 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 HTR4Q13639 388 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 OASLQ15646 514 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 SMAD2Q15796 467 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CCNG2Q16589 344 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 EML3Q32P44 896 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 MPPE1Q53F39 396 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 FYB2Q5VWT5 728 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 TANGO2Q6ICL3 276 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 VITQ6UXI7 678 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CTAGE6Q86UF2 777 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 MFSD6LQ8IWD5 586 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 ARHGAP12Q8IWW6 846 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 CTAGE4Q8IX94 777 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 UMODL1-AS1Q8N2C9 162 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 P3H4Q92791 437 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 P2RY11Q96G91 374 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 FAM83CQ9BQN1 747 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
SIN3A-205ENST00000564778 MPP6Q9NZW5 540 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 TBC1D30Q9Y2I9 924 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 MFHAS1Q9Y4C4 1052 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 WNT6Q9Y6F9 365 aa10.12□□□□□ -0.79
SIN3A-205ENST00000564778 TNFRSF10AO00220 468 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 MCF2LO15068 1137 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 NCAM2O15394 837 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 LIASO43766 372 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ZNF189O75820 626 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 LUC7L3O95232 432 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 MX2P20592 715 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 HOXD9P28356 352 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 CHRNA3P32297 505 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 IFNAR2P48551 515 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 NDST2P52849 883 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 VCPP55072 806 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ZNF33AQ06730 810 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 SLC10A2Q12908 348 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 PDK1Q15118 436 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 PDGFRLQ15198 375 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 C6orf118Q5T5N4 469 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 PTCRAQ6ISU1 281 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 CXorf57Q6NSI4 855 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ZNF783Q6ZMS7 281 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 BZW1Q7L1Q6 419 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 TFAP2DQ7Z6R9 452 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ADAT2Q7Z6V5 191 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 SETD3Q86TU7 594 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 CIR1Q86X95 450 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 LRRC49Q8IUZ0 686 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ZNF557Q8N988 423 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ATG4AQ8WYN0 398 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 FGF14Q92915 247 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 SLCO2A1Q92959 643 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 IRF7Q92985 503 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 TMA16Q96EY4 203 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 ASIC4Q96FT7 647 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 RUNDC3BQ96NL0 473 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 QKIQ96PU8 341 aaKnown RBP eCLIP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 PHF7Q9BWX1 381 aaPredicted RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 CARD6Q9BX69 1037 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 AP1M1Q9BXS5 423 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 BRD8Q9H0E9 1235 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 NOL6Q9H6R4 1146 aaKnown RBP10.11□□□□□ -0.79
SIN3A-205ENST00000564778 SPHK2Q9NRA0 654 aa10.11□□□□□ -0.79
SIN3A-205ENST00000564778 NDFIP2Q9NV92 336 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms