RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 TLR8Q9NR97 1041 aaKnown RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 SEMA4GQ9NTN9 838 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 SLC25A13Q9UJS0 675 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 ING1Q9UK53 422 aaPredicted RBP5.17□□□□□ -1.58
LINC00560-201ENST00000564593 HSF4Q9ULV5 492 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 TBX20Q9UMR3 447 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 ARHGAP26Q9UNA1 814 aa5.17□□□□□ -1.58
LINC00560-201ENST00000564593 NPIPB13A6NJU9 1138 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 NPIPB4C9JG80 1138 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TMEM232C9JQI7 657 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 DSCR3O14972 297 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ATP1A3P13637 1013 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 IDUAP35475 653 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PSMC2P35998 433 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 GOLGA8FQ08AF8 430 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TBL3Q12788 808 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 MAPRE1Q15691 268 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 LRRC8DQ7L1W4 858 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 RSRC2Q7L4I2 434 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TSPYL6Q8N831 410 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PCYOX1LQ8NBM8 494 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ST8SIA4Q92187 359 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PAIP1Q9H074 479 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ARPP21Q9UBL0 812 aaPredicted RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 KLQ9UEF7 1012 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 DMRT1Q9Y5R6 373 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SPATA31A5Q5VU36 1347 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SPATA31A6Q5VVP1 1343 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SPATA31A7Q8IWB4 1347 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SYN3O14994 580 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 NHLRC4P0CG21 123 aaPredicted RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 CYP4B1P13584 511 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PKMP14618 531 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TGM2P21980 687 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PRKCHP24723 683 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 AVPR2P30518 371 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PTH2RP49190 550 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 RPS6KA3P51812 740 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 MVDP53602 400 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 GEMIN4P57678 1058 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 LMOD3Q0VAK6 560 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 NFIL3Q16649 462 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SLC9C2Q5TAH2 1124 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PRAMEF17Q5VTA0 474 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 MTFR2Q6P444 385 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TFAP2DQ7Z6R9 452 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TMEM200AQ86VY9 491 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 RFX6Q8HWS3 928 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 UEVLDQ8IX04 471 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 VPS52Q8N1B4 723 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ATP2A3Q93084 1043 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ASB2Q96Q27 587 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 CTDSP1Q9GZU7 261 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 TAOK3Q9H2K8 898 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 ACAD9Q9H845 621 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 PREBQ9HCU5 417 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SLC22A11Q9NSA0 550 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 SMC4Q9NTJ3 1288 aa5.16□□□□□ -1.58
LINC00560-201ENST00000564593 CNOT7Q9UIV1 285 aaKnown RBP5.16□□□□□ -1.58
LINC00560-201ENST00000564593 EMSYQ7Z589 1322 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.15□□□□□ -1.59
LINC00560-201ENST00000564593 RRHO14718 337 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 GUCY1B2O75343 617 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 METTL18O95568 372 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 CD4P01730 458 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 ARSAP15289 507 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 HOXB9P17482 250 aaPredicted RBP5.15□□□□□ -1.59
LINC00560-201ENST00000564593 GSTM2P28161 218 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 ADPRHP54922 357 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 ARHGAP8P85298 464 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 GPR68Q15743 365 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 PROSER3Q2NL68 480 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 TMEM119Q4V9L6 283 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 FAAH2Q6GMR7 532 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 TMED8Q6PL24 325 aaPredicted RBP5.15□□□□□ -1.59
LINC00560-201ENST00000564593 PCSK4Q6UW60 755 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 RHPN2Q8IUC4 686 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 SCN4BQ8IWT1 228 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 RNF125Q96EQ8 232 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 RNFT2Q96EX2 444 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 P2RY11Q96G91 374 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 PCED1AQ9H1Q7 454 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 IL21RQ9HBE5 538 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.15□□□□□ -1.59
LINC00560-201ENST00000564593 IRAK4Q9NWZ3 460 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 CD207Q9UJ71 328 aa5.15□□□□□ -1.59
LINC00560-201ENST00000564593 SH2D7A6NKC9 451 aaPredicted RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 MCIDASD6RGH6 385 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 CCNT1O60563 726 aaKnown RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 CYP2A6P11509 494 aaPredicted RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 AKR1A1P14550 325 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 TACR3P29371 465 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 CLK3P49761 638 aaKnown RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 OAZ1P54368 228 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 GALNT2Q10471 571 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 SIM2Q14190 667 aaPredicted RBP5.14□□□□□ -1.59
LINC00560-201ENST00000564593 GXYLT1Q4G148 440 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 FCRLBQ6BAA4 426 aa5.14□□□□□ -1.59
LINC00560-201ENST00000564593 EXD3Q8N9H8 876 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms