RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 OR52E1Q8NGJ3 308 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 OR13C2Q8NGS9 318 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MAIP1Q8WWC4 291 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TNFRSF25Q93038 417 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 KIAA1143Q96AT1 154 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 PANX2Q96RD6 677 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 SPZ1Q9BXG8 430 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 UCK1Q9HA47 277 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MRM3Q9HC36 420 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 A1CFQ9NQ94 594 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 ABI2Q9NYB9 513 aaPredicted RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 FAM53CQ9NYF3 392 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 MRPL15Q9P015 296 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 SENP1Q9P0U3 644 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 COL20A1Q9P218 1284 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 ITGA11Q9UKX5 1188 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 DLGAP4Q9Y2H0 992 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 NOC2LQ9Y3T9 749 aaKnown RBP4.93□□□□□ -1.62
SMG1-207ENST00000563235 TELO2Q9Y4R8 837 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 TEX264Q9Y6I9 313 aa4.93□□□□□ -1.62
SMG1-207ENST00000563235 AHDC1Q5TGY3 1603 aaPredicted RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 AATKQ6ZMQ8 1374 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 HFM1A2PYH4 1435 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 MEX3AA1L020 520 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 ZNF879B4DU55 563 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TNFRSF10CO14798 259 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KRT37O76014 449 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KLHL18O94889 574 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 HLA-DRAP01903 254 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 FYNP06241 537 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 ASNSP08243 561 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GCFC2P16383 781 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 CAPZA2P47755 286 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 SLC11A1P49279 550 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GATMP50440 423 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CLCNKBP51801 687 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 C1QTNF8P60827 252 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 UBE2IP63279 158 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 ITGB3BPQ13352 177 aaPredicted RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 LINC01559Q495D7 138 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 C10orf120Q5SQS8 335 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TMTC4Q5T4D3 741 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TBC1D9BQ66K14 1250 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KLHL17Q6TDP4 642 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CUZD1Q86UP6 607 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 ZC3H7AQ8IWR0 971 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 SIX6OS1Q8N1H7 587 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 ANKFN1Q8N957 763 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 DNAAF3Q8N9W5 541 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 OR8K5Q8NH50 307 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CLHC1Q8NHS4 586 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CALML6Q8TD86 181 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 SLC26A7Q8TE54 656 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 LRRC46Q96FV0 321 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 APOPT1Q96IL0 206 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 PLIN2Q99541 437 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 REEP2Q9BRK0 252 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 C9orf16Q9BUW7 83 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TBC1D10AQ9BXI6 508 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TEX12Q9BXU0 123 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 MUC13Q9H3R2 512 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KCNK13Q9HB14 408 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GPRC5CQ9NQ84 441 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CENPMQ9NSP4 180 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 HCFC1R1Q9NWW0 138 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 RGL1Q9NZL6 768 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 SH3BP4Q9P0V3 963 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 AFF4Q9UHB7 1163 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 USP16Q9Y5T5 823 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CLTCQ00610 1675 aaKnown RBP4.92□□□□□ -1.62
SMG1-207ENST00000563235 GCC2Q8IWJ2 1684 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TTC21AQ8NDW8 1320 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GOLGA8JA6NMD2 632 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GOLGA8TH3BQL2 631 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 NKRFO15226 690 aaKnown RBP eCLIP4.92□□□□□ -1.62
SMG1-207ENST00000563235 TRAPPC3O43617 180 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 PPP6R2O75170 966 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 AK1P00568 194 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TGFAP01135 160 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 IL2RAP01589 272 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CLEC2LP0C7M8 214 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 GOLGA8HP0CJ92 632 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 MYBL1P10243 752 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KRT5P13647 590 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 EDN3P14138 238 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 ETS1P14921 441 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CPN2P22792 545 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 AHCYP23526 432 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 MCM7P33993 719 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CASP3P42574 277 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 CBX5P45973 191 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 KCNJ1P48048 391 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 RTP1P59025 263 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 VBP1P61758 197 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 PRAMEP78395 509 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 SNCBQ16143 134 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 TRAPPC3LQ5T215 181 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 FSTL4Q6MZW2 842 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 MICALCLQ6ZW33 695 aa4.92□□□□□ -1.62
SMG1-207ENST00000563235 PLEKHH3Q7Z736 793 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms