RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 ZNF180Q9UJW8 692 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 SCML2Q9UQR0 700 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 USP15Q9Y4E8 981 aaPredicted RBP19.61■□□□□ 0.73
SMPD3-203ENST00000563226 PCDHB5Q9Y5E4 795 aa19.61■□□□□ 0.73
SMPD3-203ENST00000563226 NYNRINQ9P2P1 1898 aaKnown RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 SDR42E2A6NKP2 422 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 MOCS2O96007 188 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 CCR1P32246 355 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 SLC18A2Q05940 514 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 MTFR1Q15390 333 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 SMAD1Q15797 465 aaKnown RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 MANEALQ5VSG8 457 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 RSPO2Q6UXX9 243 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 SPATA21Q7Z572 469 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 TMEM173Q86WV6 379 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 ARHGAP12Q8IWW6 846 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 OR52K1Q8NGK4 314 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 ZSCAN18Q8TBC5 510 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 SCLYQ96I15 445 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 FCRL2Q96LA5 508 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 C8orf48Q96LL4 319 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 HAPLN3Q96S86 360 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 MLPHQ9BV36 600 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 NDFIP2Q9NV92 336 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 GMIPQ9P107 970 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 FNDC1Q4ZHG4 1894 aaPredicted RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 HMX2A2RU54 273 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 WDR91A4D1P6 747 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 CCT8L1PA6NM43 557 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 DNM1LO00429 736 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 PQBP1O60828 265 aaKnown RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 NFKB1P19838 968 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 CYP2C18P33260 490 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 MAGEA9P43362 315 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 NEK3P51956 506 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 ALKBH8Q96BT7 664 aaKnown RBP19.6■□□□□ 0.73
SMPD3-203ENST00000563226 APOPT1Q96IL0 206 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 GBA3Q9H227 469 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 CRISPLD1Q9H336 500 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 ABCF3Q9NUQ8 709 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 GGT7Q9UJ14 662 aa19.6■□□□□ 0.73
SMPD3-203ENST00000563226 GREB1Q4ZG55 1949 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.59■□□□□ 0.73
SMPD3-203ENST00000563226 LPXNO60711 386 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 HOXC13P31276 330 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 TEX44Q53QW1 395 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 CES3Q6UWW8 571 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 RGS9BPQ6ZS82 235 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 C14orf80Q86SX3 495 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 ZNF276Q8N554 614 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 SEPT8Q92599 483 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 PITPNM3Q9BZ71 974 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 BRD8Q9H0E9 1235 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 SLC27A5Q9Y2P5 690 aa19.59■□□□□ 0.73
SMPD3-203ENST00000563226 TANC1Q9C0D5 1861 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 KCNU1A8MYU2 1149 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 DFFAO00273 331 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 VNN2O95498 520 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 AP2A1O95782 977 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 JCHAINP01591 159 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 SNRPAP09012 282 aaKnown RBP19.58■□□□□ 0.73
SMPD3-203ENST00000563226 FGFR3P22607 806 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 PPP2R5DQ14738 602 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 CRYMQ14894 314 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 ZNF280DQ6N043 979 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 CDHR3Q6ZTQ4 885 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 MON1AQ86VX9 555 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 CRIPAKQ8N1N5 446 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 USP33Q8TEY7 942 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 ZNF419Q96HQ0 510 aaPredicted RBP19.58■□□□□ 0.73
SMPD3-203ENST00000563226 IL1RAPL1Q9NZN1 696 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 LRFN2Q9ULH4 789 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 HS3ST4Q9Y661 456 aa19.58■□□□□ 0.73
SMPD3-203ENST00000563226 TM9SF1O15321 606 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 RFPL1O75677 317 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 ALDH1A2O94788 518 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 PGAM1P18669 254 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 RTP2Q5QGT7 225 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 KCTD11Q693B1 232 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 FUT10Q6P4F1 479 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 LRRC8CQ8TDW0 803 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 BCL7CQ8WUZ0 217 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-203ENST00000563226 TBC1D31Q96DN5 1066 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 THOC1Q96FV9 657 aaKnown RBP19.58■□□□□ 0.72
SMPD3-203ENST00000563226 DEFB118Q96PH6 123 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 ALG13Q9NP73 1137 aaKnown RBP19.58■□□□□ 0.72
SMPD3-203ENST00000563226 PRKAG3Q9UGI9 489 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 PHTF1Q9UMS5 762 aa19.58■□□□□ 0.72
SMPD3-203ENST00000563226 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-203ENST00000563226 PITPNM1O00562 1244 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 KRT37O76014 449 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 SUN1O94901 812 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 ALDH2P05091 517 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 ETV4P43268 484 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 MAGEA11P43364 429 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 PRMT2P55345 433 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 NIPAL4Q0D2K0 466 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 TAS1R1Q7RTX1 841 aa19.57■□□□□ 0.72
SMPD3-203ENST00000563226 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.57■□□□□ 0.72
SMPD3-203ENST00000563226 CNTD1Q8N815 330 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms