RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 GKN1Q9NS71 199 aa18.54■□□□□ 0.56
COMMD4-208ENST00000563220 PPARGC1AQ9UBK2 798 aaKnown RBP18.54■□□□□ 0.56
COMMD4-208ENST00000563220 IGLV3-10A0A075B6K4 115 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 ALOX15BO15296 676 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 CNTN5O94779 1100 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 OAS1P00973 400 aaKnown RBP18.53■□□□□ 0.56
COMMD4-208ENST00000563220 PTPN3P26045 913 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 MAGEA6P43360 314 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 PPP3CCP48454 512 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 HIF1AQ16665 826 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 ALFQ53S48 1182 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 NUGGCQ68CJ6 796 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 ARHGAP36Q6ZRI8 547 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 ARHGEF18Q6ZSZ5 1173 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 LZTR1Q8N653 840 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 KREMEN2Q8NCW0 462 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 PKNOX2Q96KN3 472 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 EMILIN2Q9BXX0 1053 aa18.53■□□□□ 0.56
COMMD4-208ENST00000563220 UXTQ9UBK9 157 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-208ENST00000563220 PLXNA4Q9HCM2 1894 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 DRGXA6NNA5 263 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 DFFAO00273 331 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 ARL4CP56559 192 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 PDIA2Q13087 525 aaKnown RBP18.52■□□□□ 0.56
COMMD4-208ENST00000563220 MTM1Q13496 603 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 CAMK1Q14012 370 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 AFMIDQ63HM1 303 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 LRRC31Q6UY01 552 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 CEP128Q6ZU80 1094 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 CENPUQ71F23 418 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 ITIH5Q86UX2 942 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 CCDC13Q8IYE1 715 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 GOLGA6L1Q8N7Z2 621 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 ZSCAN18Q8TBC5 510 aaPredicted RBP18.52■□□□□ 0.56
COMMD4-208ENST00000563220 TMBIM4Q9HC24 238 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 TLR9Q9NR96 1032 aa18.52■□□□□ 0.56
COMMD4-208ENST00000563220 C5orf67F2Z3F1 127 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 F5H423 210 aaPredicted RBP18.52■□□□□ 0.55
COMMD4-208ENST00000563220 C8AP07357 584 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 APRTP07741 180 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 RHOQP17081 205 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 EIF3BP55884 814 aaKnown RBP18.52■□□□□ 0.55
COMMD4-208ENST00000563220 COG7P83436 770 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 IFFO1Q0D2I5 559 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 ZBED8Q8IZ13 594 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 HS6ST3Q8IZP7 471 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 WBP2Q969T9 261 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 CYP2S1Q96SQ9 504 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 FERMT1Q9BQL6 677 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 WDR83Q9BRX9 315 aaKnown RBP18.52■□□□□ 0.55
COMMD4-208ENST00000563220 KLF16Q9BXK1 252 aaPredicted RBP18.52■□□□□ 0.55
COMMD4-208ENST00000563220 LRRC3Q9BY71 257 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 ZYG11BQ9C0D3 744 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 NOL6Q9H6R4 1146 aaKnown RBP18.52■□□□□ 0.55
COMMD4-208ENST00000563220 RWDD3Q9Y3V2 267 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 ASB3Q9Y575 518 aa18.52■□□□□ 0.55
COMMD4-208ENST00000563220 GOLGA8KD6RF30 607 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 E7ESA3 106 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 GRM6O15303 877 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 ACSL4O60488 711 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 OPHN1O60890 802 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 STC2O76061 302 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 STK10O94804 968 aaKnown RBP18.51■□□□□ 0.55
COMMD4-208ENST00000563220 KLKB1P03952 638 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 TACR2P21452 398 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 IRS1P35568 1242 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 ZBTB17Q13105 803 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 SEMA5AQ13591 1074 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 CCDC149Q6ZUS6 474 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 PID1Q7Z2X4 250 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 TFAP2DQ7Z6R9 452 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 CHSY1Q86X52 802 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 SLC22A12Q96S37 553 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 TMEM248Q9NWD8 314 aa18.51■□□□□ 0.55
COMMD4-208ENST00000563220 AVILO75366 819 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 GLUD1P00367 558 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 LRG1P02750 347 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 SLC6A4P31645 630 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 FDFT1P37268 417 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 HARS2P49590 506 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 GYS2P54840 703 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 SHHQ15465 462 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 FAM133BQ5BKY9 247 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 TXNDC8Q6A555 127 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 GAREM2Q75VX8 874 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 CIR1Q86X95 450 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 TMC8Q8IU68 726 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 ANKMY2Q8IV38 441 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 MICAL1Q8TDZ2 1067 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 SLC22A17Q8WUG5 538 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 SERPINB12Q96P63 405 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 TSGA13Q96PP4 275 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 PHACTR1Q9C0D0 580 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 VPS18Q9P253 973 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 ZNF212Q9UDV6 495 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 NRG2O14511 850 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 EIF3HO15372 352 aaKnown RBP eCLIP18.5■□□□□ 0.55
COMMD4-208ENST00000563220 MAFKO60675 156 aa18.5■□□□□ 0.55
COMMD4-208ENST00000563220 MYZAPP0CAP1 466 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms