RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 KIF5CO60282 957 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 RHOCP08134 193 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 GOT1P17174 413 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 CTNNA2P26232 953 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 OR1E1P30953 314 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 CTNNA1P35221 906 aaKnown RBP19.36■□□□□ 0.69
RAB40C-207ENST00000563109 SLC6A11P48066 632 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 HCAR3P49019 387 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 MAPKAPK2P49137 400 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 ATP13A4Q4VNC1 1196 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 TXNDC11Q6PKC3 985 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 ANKS1BQ7Z6G8 1248 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 WFIKKN2Q8TEU8 576 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 ZNF670Q9BS34 389 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 MFSD1Q9H3U5 465 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 TMEM248Q9NWD8 314 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 CWC15Q9P013 229 aaKnown RBP19.36■□□□□ 0.69
RAB40C-207ENST00000563109 KIAA1522Q9P206 1035 aaPredicted RBP19.36■□□□□ 0.69
RAB40C-207ENST00000563109 NEU3Q9UQ49 428 aa19.36■□□□□ 0.69
RAB40C-207ENST00000563109 TNFRSF10AO00220 468 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 STK25O00506 426 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 KAT7O95251 611 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 DRD1P21728 446 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 GRIA2P42262 883 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 GALK1P51570 392 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 STARD6P59095 220 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 DPYSL3Q14195 570 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 TRIM67Q6ZTA4 783 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 SETD3Q86TU7 594 aaPredicted RBP19.35■□□□□ 0.69
RAB40C-207ENST00000563109 KATNAL2Q8IYT4 538 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 RTL3Q8N8U3 475 aaKnown RBP19.35■□□□□ 0.69
RAB40C-207ENST00000563109 TERB1Q8NA31 727 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 FAM71BQ8TC56 605 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 RBM41Q96IZ5 413 aaKnown RBP19.35■□□□□ 0.69
RAB40C-207ENST00000563109 CSPG4P5Q96PW8 444 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 TBC1D17Q9HA65 648 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 ABCB8Q9NUT2 735 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 GGA2Q9UJY4 613 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 FBXO10Q9UK96 956 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 CLEC4EQ9ULY5 219 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 NDRG2Q9UN36 371 aaKnown RBP19.35■□□□□ 0.69
RAB40C-207ENST00000563109 SLC27A6Q9Y2P4 619 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 PCDHA3Q9Y5H8 950 aa19.35■□□□□ 0.69
RAB40C-207ENST00000563109 KANSL1LA0AUZ9 987 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 WASH4PA8MWX3 477 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 PI4K2BG5E9Z4 385 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 CD48P09326 243 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 PABPC1P11940 636 aaKnown RBP19.34■□□□□ 0.69
RAB40C-207ENST00000563109 KDELR1P24390 212 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 HLA-FP30511 346 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 ARSEP51690 589 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 RWDD2BP57060 319 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 LMAN2Q12907 356 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 SLC12A1Q13621 1099 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 DPYSQ14117 519 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 UBXN2BQ14CS0 331 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 TMEM196Q5HYL7 178 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 NAIF1Q69YI7 327 aaPredicted RBP19.34■□□□□ 0.69
RAB40C-207ENST00000563109 NLRP14Q86W24 1093 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 VSIG1Q86XK7 387 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 CCDC50Q8IVM0 306 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 AHI1Q8N157 1196 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.34■□□□□ 0.691e-6■■■□□ 14.6
RAB40C-207ENST00000563109 WFDC5Q8TCV5 224 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 RAPGEF5Q92565 580 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 TSC1Q92574 1164 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 KRT35Q92764 455 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 MUC3BQ9H195 1237 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 TBC1D30Q9Y2I9 924 aa19.34■□□□□ 0.69
RAB40C-207ENST00000563109 TBC1D3BA6NDS4 549 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 USP27XA6NNY8 438 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ZNF487B1APH4 448 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ZRANB2O95218 330 aaKnown RBP eCLIP19.33■□□□□ 0.682e-6■■■□□ 16.1
RAB40C-207ENST00000563109 CISD3P0C7P0 127 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ERCC2P18074 760 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CD72P21854 359 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CD70P32970 193 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ETFBP38117 255 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CETN2P41208 172 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CSKP41240 450 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 MARCKSL1P49006 195 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 LRRC32Q14392 662 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 DMC1Q14565 340 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ARTNQ5T4W7 220 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CXorf57Q6NSI4 855 aaKnown RBP19.33■□□□□ 0.68
RAB40C-207ENST00000563109 TMCO3Q6UWJ1 677 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ZNF783Q6ZMS7 281 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 RCOR2Q8IZ40 523 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 PHTF2Q8N3S3 785 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 EXD1Q8NHP7 514 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 CCDC26Q8TAB7 109 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-207ENST00000563109 RNF25Q96BH1 459 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-207ENST00000563109 NELL2Q99435 816 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 MAK16Q9BXY0 300 aaKnown RBP19.33■□□□□ 0.68
RAB40C-207ENST00000563109 LTB4R2Q9NPC1 389 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 DNAI1Q9UI46 699 aa19.33■□□□□ 0.68
RAB40C-207ENST00000563109 PACSIN2Q9UNF0 486 aaPredicted RBP19.33■□□□□ 0.68
RAB40C-207ENST00000563109 ILVBLA1L0T0 632 aa19.32■□□□□ 0.68
RAB40C-207ENST00000563109 TMEM221A6NGB7 291 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms