RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 RSPH9Q9H1X1 276 aaPredicted RBP17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 PABPC3Q9H361 631 aaKnown RBP17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 SGK2Q9HBY8 427 aa17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 PLCB1Q9NQ66 1216 aa17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 FBXL12Q9NXK8 326 aa17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.34■□□□□ 0.37
TNRC6A-209ENST00000562829 A0A1B0GVT2 93 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 TTC34A8MYJ7 566 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 C1QTNF9BB2RNN3 333 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 ERBB2P04626 1255 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 C1QTNF9P0C862 333 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 PDGFRAP16234 1089 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 CLCN1P35523 988 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 NNMTP40261 264 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 AFF3P51826 1226 aaKnown RBP17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 BPIFB4P59827 614 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 FAM193AP78312 1265 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 ECT2LQ008S8 904 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 SFSWAPQ12872 951 aaKnown RBP17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 TEAD4Q15561 434 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 PTPN20Q4JDL3 420 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 TTC39BQ5VTQ0 682 aaPredicted RBP17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 IL27RAQ6UWB1 636 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 OLFML1Q6UWY5 402 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 MMAAQ8IVH4 418 aaKnown RBP17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 NAXDQ8IW45 347 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 KDM1BQ8NB78 822 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 BIRC7Q96CA5 298 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 RPRD1AQ96P16 312 aaPredicted RBP17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 IL21RQ9HBE5 538 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 SCML1Q9UN30 329 aa17.33■□□□□ 0.36
TNRC6A-209ENST00000562829 EDDM13A0A1B0GTR0 161 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 A0A1B0GVM2 712 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 A0A1W2PP55 124 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 FAM170AA1A519 330 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 TCAF2A6NFQ2 919 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 MID1O15344 667 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 DAB1O75553 588 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 PROS1P07225 676 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 ERCC5P28715 1186 aaPredicted RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 GGCXP38435 758 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 PSMD8P48556 350 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 CSNK1EP49674 416 aaKnown RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 STK19P49842 368 aaPredicted RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 SLC6A3Q01959 620 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 EIF4EBP2Q13542 120 aaPredicted RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 KCNJ12Q14500 433 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 TRIP6Q15654 476 aaKnown RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 CST6Q15828 149 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 HLA-BQ31612 363 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 LRSAM1Q6UWE0 723 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 USP30Q70CQ3 517 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 ADAT2Q7Z6V5 191 aaKnown RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 SETD7Q8WTS6 366 aaKnown RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 PRMT1Q99873 361 aaKnown RBP17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 OMDQ99983 421 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 TM7SF3Q9NS93 570 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 SLCO3A1Q9UIG8 710 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 VANGL2Q9ULK5 521 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 WASF3Q9UPY6 502 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 FHOD1Q9Y613 1164 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 SLCO1B1Q9Y6L6 691 aa17.32■□□□□ 0.36
TNRC6A-209ENST00000562829 ITIH6Q6UXX5 1313 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 TARSL2A2RTX5 802 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 M0QYT0 321 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 RNASEH2AO75792 299 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 C7P10643 843 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 MZF1P28698 734 aaPredicted RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 NOS2P35228 1153 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 RNASE9P60153 205 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 CENPCQ03188 943 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 SLC12A1Q13621 1099 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 DRAP1Q14919 205 aaPredicted RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 MIIPQ5JXC2 388 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 C9orf64Q5T6V5 341 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 KIAA0895LQ68EN5 471 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 SMYD5Q6GMV2 418 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 FBXL22Q6P050 247 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 SLC26A9Q7LBE3 791 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 FAM71AQ8IYT1 594 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 STK40Q8N2I9 435 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 TMEM35BQ8NCS4 154 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 C1orf216Q8TAB5 229 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 TM9SF3Q9HD45 589 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 SERGEFQ9UGK8 458 aa17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 NYNRINQ9P2P1 1898 aaKnown RBP17.31■□□□□ 0.36
TNRC6A-209ENST00000562829 TRIM16O95361 564 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 CD27P26842 260 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 SLC8A1P32418 973 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 GRIA4P48058 902 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 SULT1E1P49888 294 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 OXCT1P55809 520 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 BNC1Q01954 994 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 SULT2A1Q06520 285 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 MTA1Q13330 715 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 AUHQ13825 339 aaKnown RBP17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 ZNF423Q2M1K9 1284 aa17.3■□□□□ 0.36
TNRC6A-209ENST00000562829 TAF3Q5VWG9 929 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms