RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 CDH4P55283 916 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ARHGAP8P85298 464 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 LMAN2Q12907 356 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ZNF177Q13360 481 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 STARD3Q14849 445 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 RSPO4Q2I0M5 234 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 CCDC122Q5T0U0 273 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 SH3PXD2AQ5TCZ1 1133 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 MBLAC2Q68D91 279 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 GAS2L3Q86XJ1 694 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 IGSF8Q969P0 613 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 GABRG3Q99928 467 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 NCAPGQ9BPX3 1015 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ZDHHC4Q9NPG8 344 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ANLNQ9NQW6 1124 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 ABHD10Q9NUJ1 306 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 POLR3BQ9NW08 1133 aaPredicted RBP16.92■□□□□ 0.3
PKD1-226ENST00000562425 HCN2Q9UL51 889 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 STON1Q9Y6Q2 735 aa16.92■□□□□ 0.3
PKD1-226ENST00000562425 SSU72P8A0A1W2PR75 194 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 TMEM191CA6NGB0 347 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 DRGXA6NNA5 263 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 AP5Z1O43299 807 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 CCP110O43303 1012 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 DLDP09622 509 aaKnown RBP16.91■□□□□ 0.3
PKD1-226ENST00000562425 WASP42768 502 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 AIF1P55008 147 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
PKD1-226ENST00000562425 HDAC4P56524 1084 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 LMNB2Q03252 620 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 DMWDQ09019 674 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 TBX2Q13207 712 aaPredicted RBP16.91■□□□□ 0.3
PKD1-226ENST00000562425 ZNF234Q14588 700 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 TMEM215Q68D42 235 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 ANO7Q6IWH7 933 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 SCYL2Q6P3W7 929 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 TMEM92Q6UXU6 159 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 C14orf80Q86SX3 495 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 ADIPOR2Q86V24 386 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 WFDC5Q8TCV5 224 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 FNIP1Q8TF40 1166 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 NTAN1Q96AB6 310 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 TTC17Q96AE7 1141 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 MRFAP1L1Q96HT8 127 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 ACOX2Q99424 681 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 OSBPL2Q9H1P3 480 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 CACNA2D2Q9NY47 1150 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 BCCIPQ9P287 314 aaKnown RBP eCLIP16.91■□□□□ 0.3
PKD1-226ENST00000562425 MYO1AQ9UBC5 1043 aa16.91■□□□□ 0.3
PKD1-226ENST00000562425 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
PKD1-226ENST00000562425 TCRBV21S2A2A0A5A6 115 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 E9PAM4 449 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 ATMINO43313 823 aaPredicted RBP16.9■□□□□ 0.3
PKD1-226ENST00000562425 AKR1B10O60218 316 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 SYNCRIPO60506 623 aaKnown RBP16.9■□□□□ 0.3
PKD1-226ENST00000562425 SRGAP2O75044 1071 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 RNF8O76064 485 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 PSMA2P25787 234 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 PXNP49023 591 aaPredicted RBP16.9■□□□□ 0.3
PKD1-226ENST00000562425 ZNF75DP51815 510 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 ST8SIA6P61647 398 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 SULT2A1Q06520 285 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 MAPK8IP2Q13387 824 aaPredicted RBP16.9■□□□□ 0.3
PKD1-226ENST00000562425 ENPP2Q13822 863 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 USP39Q53GS9 565 aaKnown RBP16.9■□□□□ 0.3
PKD1-226ENST00000562425 FSCBQ5H9T9 825 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 SERPINA13PQ6UXR4 307 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 SLFN11Q7Z7L1 901 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 RASSF3Q86WH2 238 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 PGBD3Q8N328 593 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 LMLNQ96KR4 655 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 CCDC42Q96M95 316 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 RETREG1Q9H6L5 497 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 TMPRSS4Q9NRS4 437 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 OR12D3Q9UGF7 316 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 RAB23Q9ULC3 237 aa16.9■□□□□ 0.3
PKD1-226ENST00000562425 IGLV3-10A0A075B6K4 115 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 I6L893 689 aaPredicted RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 GGCXP38435 758 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 CSKP41240 450 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 PLK1P53350 603 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 NRG1Q02297 640 aaPredicted RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 SCAPQ12770 1279 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 BYSLQ13895 437 aaKnown RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 SLC18A3Q16572 532 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 PLEKHG6Q3KR16 790 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 FUT11Q495W5 492 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 FNDC3BQ53EP0 1204 aaKnown RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 PITRM1Q5JRX3 1037 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 EFHC2Q5JST6 749 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 CEP68Q76N32 757 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 CIR1Q86X95 450 aaPredicted RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 ZNF683Q8IZ20 524 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 SORCS1Q8WY21 1168 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 ZYG11BQ9C0D3 744 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.29
PKD1-226ENST00000562425 SUN2Q9UH99 717 aa16.89■□□□□ 0.29
PKD1-226ENST00000562425 TBC1D30Q9Y2I9 924 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms