RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZBTB17Q13105 803 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 NAB1Q13506 487 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 FYB2Q5VWT5 728 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 TIFABQ6ZNK6 161 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 CDHR3Q6ZTQ4 885 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 SCD5Q86SK9 330 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 DCP1BQ8IZD4 617 aaKnown RBP10.06□□□□□ -0.8
SMG1-205ENST00000561947 UNC5BQ8IZJ1 945 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 ANKLE1Q8NAG6 615 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 PXYLP1Q8TE99 480 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 CDKL2Q92772 493 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 PTPRN2Q92932 1015 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 CAPNS2Q96L46 248 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 HAPLN3Q96S86 360 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 CFHR5Q9BXR6 569 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 ALG13Q9NP73 1137 aaKnown RBP10.06□□□□□ -0.8
SMG1-205ENST00000561947 KANSL3Q9P2N6 904 aa10.06□□□□□ -0.8
SMG1-205ENST00000561947 ERI2A8K979 691 aaKnown RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 KIF3CO14782 793 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 SERPINB4P48594 390 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 NCALDP61601 193 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 ZNF33AQ06730 810 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 TEX44Q53QW1 395 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 KCTD11Q693B1 232 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 OR52K1Q8NGK4 314 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 DPF3Q92784 378 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 CASP10Q92851 521 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 AGAP3Q96P47 875 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 CASS4Q9NQ75 786 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 STARD7Q9NQZ5 370 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 ABI2Q9NYB9 513 aaPredicted RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 SFMBT1Q9UHJ3 866 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 PLLPQ9Y342 182 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 TTC3P53804 2025 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 PAGE1O75459 146 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 SRGAP2BP0DMP2 458 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 HOXC13P31276 330 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 CCR1P32246 355 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 HTR7P34969 479 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 PGFP49763 221 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 OLIG2Q13516 323 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 SPANXN3Q5MJ09 141 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 MROH9Q5TGP6 573 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 MANEALQ5VSG8 457 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 LHX8Q68G74 356 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 RWDD4Q6NW29 188 aaKnown RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 PACS1Q6VY07 963 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 ZNF398Q8TD17 642 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 FUBP3Q96I24 572 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMG1-205ENST00000561947 CELF6Q96J87 481 aaKnown RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 MLPHQ9BV36 600 aaPredicted RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 TSSK1BQ9BXA7 367 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 FTHL17Q9BXU8 183 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 SIK2Q9H0K1 926 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 ECT2Q9H8V3 914 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 NMUR1Q9HB89 426 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 PCMTD2Q9NV79 361 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 DNAJB4Q9UDY4 337 aa10.05□□□□□ -0.8
SMG1-205ENST00000561947 PRG3Q9Y2Y8 225 aaPredicted RBP10.05□□□□□ -0.8
SMG1-205ENST00000561947 A0A1W2PQH9 124 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 CFAP73A6NFT4 308 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 FGF10O15520 208 aaPredicted RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 MSI1O43347 362 aaKnown RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 INHAP05111 366 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 POLBP06746 335 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 TROVE2P10155 538 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMG1-205ENST00000561947 NFKB1P19838 968 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 BGNP21810 368 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 ALDH3A1P30838 453 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 PPP2R5DQ14738 602 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SETDB1Q15047 1291 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 NFE2Q16621 373 aaPredicted RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 ZNF449Q6P9G9 518 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 ZSCAN18Q8TBC5 510 aaPredicted RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 TEKT5Q96M29 485 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 TSGA13Q96PP4 275 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SLC13A1Q9BZW2 595 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 NPHS2Q9NP85 383 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 TMEM161AQ9NX61 479 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SLC17A6Q9P2U8 582 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 VANGL2Q9ULK5 521 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 ARHGAP42A6NI28 874 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 ARVCFO00192 962 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 KLF11O14901 512 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SYN3O14994 580 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 USP12O75317 370 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 TRPA1O75762 1119 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 DCTN3O75935 186 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 IL1BP01584 269 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 JCHAINP01591 159 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 NEFHP12036 1026 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 COL6A1P12109 1028 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 HNRNPH1P31943 449 aaKnown RBP10.04□□□□□ -0.8
SMG1-205ENST00000561947 CRHR1P34998 444 aa10.04□□□□□ -0.8
SMG1-205ENST00000561947 SLC20A2Q08357 652 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms