RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 OPRD1P41143 372 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 DNA2P51530 1060 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 ECT2LQ008S8 904 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 SCAPQ12770 1279 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 ASTE1Q2TB18 679 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 USP39Q53GS9 565 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 FAM133BQ5BKY9 247 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 PPP1R15BQ5SWA1 713 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 SH3PXD2AQ5TCZ1 1133 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 NADSYN1Q6IA69 706 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 FSTL4Q6MZW2 842 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TXNDC11Q6PKC3 985 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TMCO3Q6UWJ1 677 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 CEP68Q76N32 757 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 PEX26Q7Z412 305 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 RYBPQ8N488 228 aaPredicted RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 CAMKK1Q8N5S9 505 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 RNF10Q8N5U6 811 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 CCDC185Q8N715 623 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 NIPA2Q8N8Q9 360 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 ATP11CQ8NB49 1132 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TXNDC5Q8NBS9 432 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 RIN3Q8TB24 985 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 TEKT4Q8WW24 435 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 ARHGEF26Q96DR7 871 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 BTBD6Q96KE9 485 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 SPACA7Q96KW9 195 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 LRFN3Q9BTN0 628 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 PACSIN1Q9BY11 444 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 MAGEH1Q9H213 219 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 PRDM16Q9HAZ2 1276 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 DYRK4Q9NR20 520 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 RBM12Q9NTZ6 932 aaKnown RBP11.01□□□□□ -0.65
TPM1-229ENST00000561242 MPP6Q9NZW5 540 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 DNAI1Q9UI46 699 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 GUCA1BQ9UMX6 200 aa11.01□□□□□ -0.65
TPM1-229ENST00000561242 LRRD1A4D1F6 860 aa11□□□□□ -0.65
TPM1-229ENST00000561242 GOLGA6L9A6NEM1 432 aa11□□□□□ -0.65
TPM1-229ENST00000561242 OTOL1A6NHN0 477 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 DRGXA6NNA5 263 aa11□□□□□ -0.65
TPM1-229ENST00000561242 BUB1O43683 1085 aa11□□□□□ -0.65
TPM1-229ENST00000561242 BNIP3LO60238 219 aa11□□□□□ -0.65
TPM1-229ENST00000561242 GREM1O60565 184 aa11□□□□□ -0.65
TPM1-229ENST00000561242 LRIG2O94898 1065 aa11□□□□□ -0.65
TPM1-229ENST00000561242 ZRANB2O95218 330 aaKnown RBP eCLIP11□□□□□ -0.65
TPM1-229ENST00000561242 APBB3O95704 486 aa11□□□□□ -0.65
TPM1-229ENST00000561242 PDGFBP01127 241 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 KRT1P04264 644 aa11□□□□□ -0.65
TPM1-229ENST00000561242 GGCXP38435 758 aa11□□□□□ -0.65
TPM1-229ENST00000561242 CSKP41240 450 aa11□□□□□ -0.65
TPM1-229ENST00000561242 PTPN5P54829 565 aa11□□□□□ -0.65
TPM1-229ENST00000561242 YBEYP58557 167 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 NRG1Q02297 640 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 LMAN2Q12907 356 aa11□□□□□ -0.65
TPM1-229ENST00000561242 TFDP2Q14188 446 aa11□□□□□ -0.65
TPM1-229ENST00000561242 SMTNL2Q2TAL5 461 aa11□□□□□ -0.65
TPM1-229ENST00000561242 PITRM1Q5JRX3 1037 aa11□□□□□ -0.65
TPM1-229ENST00000561242 KCNT1Q5JUK3 1230 aa11□□□□□ -0.65
TPM1-229ENST00000561242 CFAP58Q5T655 872 aa11□□□□□ -0.65
TPM1-229ENST00000561242 RFX8Q6ZV50 586 aa11□□□□□ -0.65
TPM1-229ENST00000561242 C11orf74Q86VG3 221 aa11□□□□□ -0.65
TPM1-229ENST00000561242 RFX6Q8HWS3 928 aa11□□□□□ -0.65
TPM1-229ENST00000561242 CCDC105Q8IYK2 499 aa11□□□□□ -0.65
TPM1-229ENST00000561242 ALLCQ8N6M5 410 aa11□□□□□ -0.65
TPM1-229ENST00000561242 ATOH1Q92858 354 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 CLDN23Q96B33 292 aa11□□□□□ -0.65
TPM1-229ENST00000561242 RBM41Q96IZ5 413 aaKnown RBP11□□□□□ -0.65
TPM1-229ENST00000561242 SNRNP25Q9BV90 132 aaKnown RBP11□□□□□ -0.65
TPM1-229ENST00000561242 FAM126AQ9BYI3 521 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 CHRDQ9H2X0 955 aa11□□□□□ -0.65
TPM1-229ENST00000561242 FBRSQ9HAH7 460 aa11□□□□□ -0.65
TPM1-229ENST00000561242 SP110Q9HB58 689 aa11□□□□□ -0.65
TPM1-229ENST00000561242 OSGEPQ9NPF4 335 aa11□□□□□ -0.65
TPM1-229ENST00000561242 XPO7Q9UIA9 1087 aaKnown RBP11□□□□□ -0.65
TPM1-229ENST00000561242 FBXO4Q9UKT5 387 aa11□□□□□ -0.65
TPM1-229ENST00000561242 MTF2Q9Y483 593 aaPredicted RBP11□□□□□ -0.65
TPM1-229ENST00000561242 TCRBV5S1A1TA0A578 114 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 DFFAO00273 331 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 NDUFS2O75306 463 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 LRCH4O75427 683 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 LCA5LO95447 670 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 DNTTP04053 509 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 RARAP10276 462 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 MX2P20592 715 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 NFKBIAP25963 317 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 WASP42768 502 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 HCAR3P49019 387 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 GNA12Q03113 381 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 PARP15Q460N3 678 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 TMCO4Q5TGY1 634 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 LRRC38Q5VT99 294 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 FAM46CQ5VWP2 391 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 KIAA1324Q6UXG2 1013 aaKnown RBP10.99□□□□□ -0.65
TPM1-229ENST00000561242 RAD9BQ6WBX8 426 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 SYT13Q7L8C5 426 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 C14orf80Q86SX3 495 aa10.99□□□□□ -0.65
TPM1-229ENST00000561242 C12orf40Q86WS4 652 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms