RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ZNF578Q96N58 590 aaPredicted RBP19.23■□□□□ 0.67
TPM1-226ENST00000560959 USP25Q9UHP3 1055 aa19.23■□□□□ 0.67
TPM1-226ENST00000560959 ATMQ13315 3056 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 TYW5A2RUC4 315 aaKnown RBP19.22■□□□□ 0.67
TPM1-226ENST00000560959 MSI1O43347 362 aaKnown RBP19.22■□□□□ 0.67
TPM1-226ENST00000560959 SETSIPP0DME0 302 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 SLC6A4P31645 630 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 ME1P48163 572 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 ADPRHP54922 357 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 DAOAP59103 153 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 CXADRP78310 365 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 CCDC173Q0VFZ6 552 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 KCNH2Q12809 1159 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 GOLGA7BQ2TAP0 167 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 PKDCCQ504Y2 493 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 SGO2Q562F6 1265 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 PRPF39Q86UA1 669 aaKnown RBP19.22■□□□□ 0.67
TPM1-226ENST00000560959 CCDC117Q8IWD4 279 aaPredicted RBP19.22■□□□□ 0.67
TPM1-226ENST00000560959 LSMEM2Q8N112 164 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 SIX6OS1Q8N1H7 587 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 AADATQ8N5Z0 425 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 OR14C36Q8NHC7 312 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 IRGQQ8WZA9 623 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 TATDN2Q93075 761 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 FAM131CQ96AQ9 280 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 KIAA1257Q9ULG3 409 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 ERVW-1Q9UQF0 538 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 DMTF1Q9Y222 760 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 TENM4Q6N022 2769 aa19.22■□□□□ 0.67
TPM1-226ENST00000560959 GOLGA6L7A0A1B0GV03 622 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 STX10O60499 249 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 PLXNA2O75051 1894 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 MOCS3O95396 460 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 MT-CO3P00414 261 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 ZNF211Q13398 564 aaPredicted RBP19.21■□□□□ 0.67
TPM1-226ENST00000560959 ADAM9Q13443 819 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 SPATS2Q86XZ4 545 aaKnown RBP19.21■□□□□ 0.67
TPM1-226ENST00000560959 HIC2Q96JB3 615 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 MMRN2Q9H8L6 949 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 ARHGAP20Q9P2F6 1191 aa19.21■□□□□ 0.67
TPM1-226ENST00000560959 TBC1D3DA0A087WVF3 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3IA0A087WXS9 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3EA0A087X179 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3KA0A087X1G2 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3FA6NER0 549 aaPredicted RBP19.2■□□□□ 0.66
TPM1-226ENST00000560959 TTC34A8MYJ7 566 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3LB9A6J9 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 SLC7A4O43246 635 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 DXOO77932 396 aaKnown RBP19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3HP0C7X1 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 MXI1P50539 228 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBX4P57082 545 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 ECT2LQ008S8 904 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TAF1BQ53T94 588 aaPredicted RBP19.2■□□□□ 0.66
TPM1-226ENST00000560959 PITRM1Q5JRX3 1037 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 BROXQ5VW32 411 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3GQ6DHY5 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3CQ6IPX1 549 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 TBC1D3Q8IZP1 549 aaPredicted RBP19.2■□□□□ 0.66
TPM1-226ENST00000560959 PTPRN2Q92932 1015 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 LGMNQ99538 433 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 STIM2Q9P246 746 aa19.2■□□□□ 0.66
TPM1-226ENST00000560959 RHOBTB3O94955 611 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 VDRP11473 427 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 PCBP4P57723 403 aaKnown RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 TMPRSS3P57727 454 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 YWHAEP62258 255 aaKnown RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 NNTQ13423 1086 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 CDH18Q13634 790 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 ELAVL3Q14576 367 aaKnown RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 NADSYN1Q6IA69 706 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 GUF1Q8N442 669 aaKnown RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 SNRNP27Q8WVK2 155 aaKnown RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 PRICKLE1Q96MT3 831 aaPredicted RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 SLCO3A1Q9UIG8 710 aa19.19■□□□□ 0.66
TPM1-226ENST00000560959 ARID1BQ8NFD5 2236 aaPredicted RBP19.19■□□□□ 0.66
TPM1-226ENST00000560959 O00370 1275 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 MZF1P28698 734 aaPredicted RBP19.18■□□□□ 0.66
TPM1-226ENST00000560959 DRD3P35462 400 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 NNMTP40261 264 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 PSMD8P48556 350 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 ERVPABLB-1P60509 514 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 RPS24P62847 133 aaKnown RBP19.18■□□□□ 0.66
TPM1-226ENST00000560959 SLC12A1Q13621 1099 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 STAT4Q14765 748 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 FSCBQ5H9T9 825 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 MS4A13Q5J8X5 152 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 TRIM69Q86WT6 500 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 STK40Q8N2I9 435 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 CARNMT1Q8N4J0 409 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 UBA3Q8TBC4 463 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 SLC35F5Q8WV83 523 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 CCDC47Q96A33 483 aaKnown RBP19.18■□□□□ 0.66
TPM1-226ENST00000560959 CYTH4Q9UIA0 394 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 RCOR1Q9UKL0 485 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 CFAP45Q9UL16 551 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 COQ4Q9Y3A0 265 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 MAST4O15021 2626 aa19.18■□□□□ 0.66
TPM1-226ENST00000560959 MYLKQ15746 1914 aa19.17■□□□□ 0.66
TPM1-226ENST00000560959 SIGLEC6O43699 453 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms