RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 CCAR2Q8N163 923 aaKnown RBP16.72■□□□□ 0.27
SPG21-211ENST00000560564 IGSF8Q969P0 613 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 PGAP3Q96FM1 320 aaPredicted RBP16.72■□□□□ 0.27
SPG21-211ENST00000560564 PCED1AQ9H1Q7 454 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 VPS16Q9H269 839 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 HSD3B7Q9H2F3 369 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 SYNCQ9H7C4 482 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 PIGVQ9NUD9 493 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 FANCLQ9NW38 375 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 RRN3Q9NYV6 651 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 COX16Q9P0S2 106 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 KIAA1522Q9P206 1035 aaPredicted RBP16.72■□□□□ 0.27
SPG21-211ENST00000560564 SUSD2Q9UGT4 822 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 SUN2Q9UH99 717 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 NOCTQ9UK39 431 aaKnown RBP16.72■□□□□ 0.27
SPG21-211ENST00000560564 ERVW-1Q9UQF0 538 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 SIK3Q9Y2K2 1263 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 HS3ST4Q9Y661 456 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 AKAP13Q12802 2813 aa16.72■□□□□ 0.27
SPG21-211ENST00000560564 TP53BP1Q12888 1972 aaPredicted RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 H0Y626 953 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 M0QYT0 321 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 SIN3BO75182 1162 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 PAGE1O75459 146 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 LSM8O95777 96 aaKnown RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 SRPRAP08240 638 aaKnown RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 ABCB4P21439 1286 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 KCNA4P22459 653 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 GGCXP38435 758 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 CXCR3P49682 368 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 NOVA1P51513 510 aaKnown RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 PLK1P53350 603 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 CENPCQ03188 943 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 SEMA3BQ13214 749 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 UAP1L1Q3KQV9 507 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 C9orf64Q5T6V5 341 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 TTC39BQ5VTQ0 682 aaPredicted RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 TRNP1Q6NT89 227 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 APTXQ7Z2E3 356 aaKnown RBP16.71■□□□□ 0.27
SPG21-211ENST00000560564 BNIPLQ7Z465 357 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 C14orf80Q86SX3 495 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 PIP4P1Q86T03 277 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 OR2I1PQ8NGU4 316 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 C18orf8Q96DM3 657 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 ALG14Q96F25 216 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 CNTNAP3BQ96NU0 1288 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 CNTNAP3Q9BZ76 1288 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 SLC12A6Q9UHW9 1150 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 SLCO3A1Q9UIG8 710 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 SLCO1B1Q9Y6L6 691 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 TMEM131Q92545 1883 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 CHD5Q8TDI0 1954 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 DOCK9Q9BZ29 2069 aa16.71■□□□□ 0.27
SPG21-211ENST00000560564 PLXNA2O75051 1894 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 MEI4A8MW99 385 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 TTC34A8MYJ7 566 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 UPK3BL1B0FP48 263 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 C10orf142B7Z368 130 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 UPK3BL2E5RIL1 263 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ADCY5O95622 1261 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 MMEP08473 750 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 CEACAM1P13688 526 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 PDGFRAP16234 1089 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ZNF18P17022 549 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 CHRNB2P17787 502 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 MZF1P28698 734 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 FLT3P36888 993 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 STK19P49842 368 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 COPB1P53618 953 aaKnown RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 ECT2LQ008S8 904 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 NME3Q13232 169 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 MTA1Q13330 715 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 SLC12A1Q13621 1099 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 NCAPHQ15003 741 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 C2CD6Q53TS8 623 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 RABGAP1LQ5R372 815 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ZNF776Q68DI1 518 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 FAM124AQ86V42 546 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ERICH1Q86X53 443 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 CCDC117Q8IWD4 279 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 DHX40Q8IX18 779 aaKnown RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 ZNF683Q8IZ20 524 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ZCCHC9Q8N567 271 aaKnown RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 MINDY1Q8N5J2 469 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 SLC20A1Q8WUM9 679 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 C6orf106Q9H6K1 298 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 ANO10Q9NW15 660 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ARHGEF38Q9NXL2 777 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPG21-211ENST00000560564 LIMA1Q9UHB6 759 aaKnown RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 TMEM59LQ9UK28 342 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 VANGL2Q9ULK5 521 aa16.7■□□□□ 0.26
SPG21-211ENST00000560564 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
SPG21-211ENST00000560564 A0A1B0GTW7 788 aa16.69■□□□□ 0.26
SPG21-211ENST00000560564 FAM170AA1A519 330 aa16.69■□□□□ 0.26
SPG21-211ENST00000560564 TARSL2A2RTX5 802 aaKnown RBP16.69■□□□□ 0.26
SPG21-211ENST00000560564 MOCS3O95396 460 aa16.69■□□□□ 0.26
SPG21-211ENST00000560564 CYP1A1P04798 512 aaPredicted RBP16.69■□□□□ 0.26
SPG21-211ENST00000560564 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms