RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ILF2Q12905 390 aaKnown RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 EIF4EBP2Q13542 120 aaPredicted RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 TIGD5Q53EQ6 642 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 FAM133BQ5BKY9 247 aaKnown RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 GRTP1Q5TC63 336 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 FAXCQ5TGI0 409 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 SYPL2Q5VXT5 272 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 ICE2Q659A1 982 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 CCSAPQ6IQ19 270 aaPredicted RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 CXCL17Q6UXB2 119 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 DENND5BQ6ZUT9 1274 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 NLRP9Q7RTR0 991 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 LINC00523Q86TU6 105 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 LCA5Q86VQ0 697 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 ZNF567Q8N184 647 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 PYROXD2Q8N2H3 581 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 TAB3Q8N5C8 712 aaPredicted RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 RSPH1Q8WYR4 309 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 TRIB2Q92519 343 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 FATE1Q969F0 183 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 MYLPFQ96A32 169 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 MRRFQ96E11 262 aaKnown RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 OXNAD1Q96HP4 312 aaPredicted RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 CPNE1Q99829 537 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 GBA3Q9H227 469 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 STN1Q9H668 368 aaKnown RBP9.96□□□□□ -0.82
RTF1-206ENST00000560447 WDCPQ9H6R7 721 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 XPNPEP3Q9NQH7 507 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 ABCC13Q9NSE7 274 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 DDIT4Q9NX09 232 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 MIOSQ9NXC5 875 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 BFARQ9NZS9 450 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 SLC17A7Q9P2U7 560 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 DCDC2Q9UHG0 476 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 PADI3Q9ULW8 664 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 CHKBQ9Y259 395 aa9.96□□□□□ -0.82
RTF1-206ENST00000560447 CREB3O43889 395 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CSH1P0DML2 217 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CSH2P0DML3 217 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 SRGAP2BP0DMP2 458 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CCNCP24863 283 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 PTPN3P26045 913 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 GP5P40197 560 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 POLD2P49005 469 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CDK7P50613 346 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CSE1LP55060 971 aaKnown RBP9.95□□□□□ -0.82
RTF1-206ENST00000560447 NME3Q13232 169 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 MTA1Q13330 715 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 PRPSAP1Q14558 356 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 PPP2R5DQ14738 602 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CRYMQ14894 314 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 KRT72Q14CN4 511 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 TBCCQ15814 346 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 TRIM71Q2Q1W2 868 aaKnown RBP9.95□□□□□ -0.82
RTF1-206ENST00000560447 TEX44Q53QW1 395 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 NAPEPLDQ6IQ20 393 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 PACS1Q6VY07 963 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 HFE2Q6ZVN8 426 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 PID1Q7Z2X4 250 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 TMEM135Q86UB9 458 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
RTF1-206ENST00000560447 CCNYQ8ND76 341 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 C3orf58Q8NDZ4 430 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 ARNTL2Q8WYA1 636 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 E2F7Q96AV8 911 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 ERP27Q96DN0 273 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 FUBP3Q96I24 572 aaKnown RBP eCLIP9.95□□□□□ -0.82
RTF1-206ENST00000560447 FAM111AQ96PZ2 611 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 LGMNQ99538 433 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 RTP3Q9BQQ7 232 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 IL22Q9GZX6 179 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 MYLK2Q9H1R3 596 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CATSPERBQ9H7T0 1116 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 SLCO1B3Q9NPD5 702 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 CASS4Q9NQ75 786 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 SMYD2Q9NRG4 433 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 ARHGEF38Q9NXL2 777 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 KCNK4Q9NYG8 393 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 KLHL8Q9P2G9 620 aaPredicted RBP9.95□□□□□ -0.82
RTF1-206ENST00000560447 KANSL3Q9P2N6 904 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 MID2Q9UJV3 735 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 SORCS3Q9UPU3 1222 aa9.95□□□□□ -0.82
RTF1-206ENST00000560447 MYO18AQ92614 2054 aaKnown RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 FAM237BA0A1B0GVD1 139 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 WASH4PA8MWX3 477 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 CXorf49A8MYA2 514 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 IRAK2O43187 625 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 B3GAT3O94766 335 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 ATP6V1G2O95670 118 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 ASGR1P07306 291 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 BPGMP07738 259 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 USP17L7P0C7H9 530 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 NEFHP12036 1026 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 PSMB4P28070 264 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 CD52P31358 61 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 SPRP35270 261 aaPredicted RBP9.94□□□□□ -0.82
RTF1-206ENST00000560447 THPOP40225 353 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 MAGEA12P43365 314 aa9.94□□□□□ -0.82
RTF1-206ENST00000560447 MNAT1P51948 309 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms