RNA–Protein interactions for RNA: ENST00000560428.1

TNFAIP2-206, Transcript of TNF alpha induced protein 2, humanhuman

TSL 5

Gene TNFAIP2, Length 773 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-206ENST00000560428 MYL5Q02045 173 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 BRMS1LQ5PSV4 323 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 N4BP2L1Q5TBK1 243 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 DCAF12L1Q5VU92 463 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 OTUD1Q5VV17 481 aaPredicted RBP18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 TAF3Q5VWG9 929 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 PSAPL1Q6NUJ1 521 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 FBXL22Q6P050 247 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 XYLT1Q86Y38 959 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 ANKRD20A12PQ8NF67 263 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 PAXBP1Q9Y5B6 917 aa18.57■□□□□ 0.56
TNFAIP2-206ENST00000560428 A0A1B0GTW7 788 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 TARSL2A2RTX5 802 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 UPK3BL1B0FP48 263 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 UPK3BL2E5RIL1 263 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 F9P00740 461 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 CEACAM1P13688 526 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 CXCR3P49682 368 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 JAM2P57087 298 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 NOMO3P69849 1222 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 SULT2A1Q06520 285 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 AUHQ13825 339 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 UAP1L1Q3KQV9 507 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 C5orf22Q49AR2 442 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 CCDC183Q5T5S1 534 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 ACBD5Q5T8D3 534 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 FAM102AQ5T9C2 384 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 SH3PXD2AQ5TCZ1 1133 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 RNF219Q5W0B1 726 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 USP30Q70CQ3 517 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 ARCQ7LC44 396 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 APCDD1Q8J025 514 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 RPRD1AQ96P16 312 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 PPP1R9BQ96SB3 815 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 GTPBP2Q9BX10 602 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 PIGVQ9NUD9 493 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 ARHGEF38Q9NXL2 777 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 LIMA1Q9UHB6 759 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 NOCTQ9UK39 431 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 SIK3Q9Y2K2 1263 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 HS3ST4Q9Y661 456 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 ADAMTS9Q9P2N4 1935 aa18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 NYNRINQ9P2P1 1898 aaKnown RBP18.56■□□□□ 0.56
TNFAIP2-206ENST00000560428 CACNA1EQ15878 2313 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 EDDM13A0A1B0GTR0 161 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 RNASEH1O60930 286 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SIN3BO75182 1162 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 PAGE1O75459 146 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 MMEP08473 750 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 MAOBP27338 520 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 PMLP29590 882 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 CTSOP43234 321 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 KLK7P49862 253 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SULT1E1P49888 294 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 VASPP50552 380 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 COPB1P53618 953 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 RNASE9P60153 205 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 POLR2FP61218 127 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SFSWAPQ12872 951 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SLC25A52Q3SY17 297 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 C9orf64Q5T6V5 341 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 CXorf57Q6NSI4 855 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SND1Q7KZF4 910 aaKnown RBP eCLIP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 FAM124AQ86V42 546 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 CIR1Q86X95 450 aaPredicted RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 HDDC3Q8N4P3 179 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 MINDY1Q8N5J2 469 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 IGSF8Q969P0 613 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 ADAM33Q9BZ11 813 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 ZDHHC5Q9C0B5 715 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 BTBD1Q9H0C5 482 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 WDCPQ9H6R7 721 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 SGK2Q9HBY8 427 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 FSCN3Q9NQT6 498 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 DNAAF2Q9NVR5 837 aaKnown RBP18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 VANGL2Q9ULK5 521 aa18.55■□□□□ 0.56
TNFAIP2-206ENST00000560428 ASCC3Q8N3C0 2202 aaKnown RBP18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 OPHN1O60890 802 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 CLDN11O75508 207 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 GFPT2O94808 682 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 PDGFRAP16234 1089 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 ACSL1P33121 698 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 SOX5P35711 763 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 NNMTP40261 264 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 CDR2Q01850 454 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 CENPCQ03188 943 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 DEUP1Q05D60 604 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 SEMA3BQ13214 749 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 DHX40Q8IX18 779 aaKnown RBP18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 SPAG5Q96R06 1193 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 TKTL2Q9H0I9 626 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 PABPC3Q9H361 631 aaKnown RBP18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 MTG2Q9H4K7 406 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 NCKAP1Q9Y2A7 1128 aa18.54■□□□□ 0.56
TNFAIP2-206ENST00000560428 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.53■□□□□ 0.56
TNFAIP2-206ENST00000560428 LRRC10BA6NIK2 292 aa18.53■□□□□ 0.56
TNFAIP2-206ENST00000560428 LGALS16A8MUM7 142 aa18.53■□□□□ 0.56
TNFAIP2-206ENST00000560428 TTC34A8MYJ7 566 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms