RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RWDD2BP57060 319 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 COPS2P61201 443 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 PFKPQ01813 784 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC9A4Q6AI14 798 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 ASTLQ6HA08 431 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 MFSD7Q6UXD7 560 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 LRRC31Q6UY01 552 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 C12orf40Q86WS4 652 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 RCOR2Q8IZ40 523 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 UMODL1-AS1Q8N2C9 162 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 OR52K2Q8NGK3 314 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 WFDC5Q8TCV5 224 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 MSANTD3Q96H12 275 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 RPRD1AQ96P16 312 aaPredicted RBP15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 RNF157Q96PX1 679 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 WDR24Q96S15 920 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 HERPUD2Q9BSE4 406 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 CARD9Q9H257 536 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 NDFIP2Q9NV92 336 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 MPP6Q9NZW5 540 aa15.25■□□□□ 0.03
SNRPA1-207ENST00000559309 hCG_1818297A0A087WSY0 165 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 EEF2KO00418 725 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 TBL1XO60907 577 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ZRANB2O95218 330 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 LUC7L3O95232 432 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 PYGMP11217 842 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ERCC2P18074 760 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 MAPKAPK2P49137 400 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 PLK1P53350 603 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ETF1P62495 437 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ADCY2Q08462 1091 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 MESP2Q0VG99 397 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 MMRN1Q13201 1228 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 PAFAH1B3Q15102 231 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ANKRD20A8PQ5CZ79 823 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ZNF569Q5MCW4 686 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 PAPD7Q5XG87 772 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 TPGS1Q6ZTW0 290 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 SETD3Q86TU7 594 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ZSCAN30Q86W11 494 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 MAP7D3Q8IWC1 876 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 UBALD2Q8IYN6 164 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 CFAP52Q8N1V2 620 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 RTL3Q8N8U3 475 aaKnown RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 BBS2Q9BXC9 721 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 C8orf33Q9H7E9 229 aaPredicted RBP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 ETNK2Q9NVF9 386 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 WNT16Q9UBV4 365 aa15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNRPA1-207ENST00000559309 CXorf51AA0A1B0GTR3 108 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 NEDD8-MDP1E9PL57 170 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 H3BRJ5 948 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 CREB3O43889 395 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 TULP3O75386 442 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 CYBBP04839 570 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 ALADP13716 330 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 PRLRP16471 622 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 EPHB2P29323 1055 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 HLA-FP30511 346 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 CTHP32929 405 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 TPI1P60174 286 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 NR1H3Q13133 447 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 KLF1Q13351 362 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 PPP6R3Q5H9R7 873 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 FSCBQ5H9T9 825 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 ZNF783Q6ZMS7 281 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 SPOCD1Q6ZMY3 1216 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 RALGPS2Q86X27 583 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 CIR1Q86X95 450 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 ARHGAP12Q8IWW6 846 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 UBL4BQ8N7F7 174 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 PLD5Q8N7P1 536 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 ZNF557Q8N988 423 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 KCTD6Q8NC69 237 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 DDI1Q8WTU0 396 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 EZH1Q92800 747 aaPredicted RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 RBM41Q96IZ5 413 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 LRRC19Q9H756 370 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 KLHL11Q9NVR0 708 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 PLK2Q9NYY3 685 aa15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 INTS6Q9UL03 887 aaKnown RBP15.23■□□□□ 0.03
SNRPA1-207ENST00000559309 ILVBLA1L0T0 632 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 LRRD1A4D1F6 860 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 SPECC1L-ADORA2AF8WAN1 911 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 CES2O00748 559 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 KRT1P04264 644 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 ATP1A1P05023 1023 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 DEKP35659 375 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 ARL4AP40617 200 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 AMPD2Q01433 879 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 RPS6KA1Q15418 735 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 SLC44A4Q53GD3 710 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 TFDP3Q5H9I0 405 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 NAIF1Q69YI7 327 aaPredicted RBP15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 NCBP2-AS2Q69YL0 99 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 TXNDC11Q6PKC3 985 aa15.22■□□□□ 0.03
SNRPA1-207ENST00000559309 RASGEF1CQ8N431 466 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms