RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 STK4Q13043 487 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 PDGFRLQ15198 375 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 CCDC6Q16204 474 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 ZNF699Q32M78 642 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-213ENST00000558988 CFAP221Q4G0U5 840 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 FSTL4Q6MZW2 842 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 C1orf228Q6PIY5 440 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 DENND5BQ6ZUT9 1274 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 CPA6Q8N4T0 437 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 PLEKHO2Q8TD55 490 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 FNIP1Q8TF40 1166 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 PAGE5Q96GU1 130 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 FUBP3Q96I24 572 aaKnown RBP eCLIP7.78□□□□□ -1.16
SPG11-213ENST00000558988 P2RY13Q9BPV8 354 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 IER2Q9BTL4 223 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 FAM126AQ9BYI3 521 aaPredicted RBP7.78□□□□□ -1.16
SPG11-213ENST00000558988 LINC00597Q9H2U6 94 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 KIF9Q9HAQ2 790 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 TRPM5Q9NZQ8 1165 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 SLC8A2Q9UPR5 921 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 NME7Q9Y5B8 376 aa7.78□□□□□ -1.16
SPG11-213ENST00000558988 OTOGLQ3ZCN5 2332 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 SDK1Q7Z5N4 2213 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 PVALEFA0A1B0GWK0 134 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 MED19A0JLT2 244 aaPredicted RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 LRRIQ3A6PVS8 624 aaPredicted RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 K7ESF4 209 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 KLRC4O43908 158 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 NR3C1P04150 777 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 RPN1P04843 607 aaKnown RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 MBL2P11226 248 aaPredicted RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 GJA4P35212 333 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 PIK3CAP42336 1068 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 MAGEA11P43364 429 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 KRT85P78386 507 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 TAF10Q12962 218 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 ZNF77Q15935 545 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 ZNF667Q5HYK9 610 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 TDRD10Q5VZ19 366 aaKnown RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 LAIR1Q6GTX8 287 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 CNNM4Q6P4Q7 775 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 FAM171BQ6P995 826 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 VSTM1Q6UX27 236 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 ACOT1Q86TX2 421 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 LONP2Q86WA8 852 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 B3GALNT2Q8NCR0 500 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 RPLP0P6Q8NHW5 317 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 MYCBPAPQ8TBZ2 947 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 SPATA18Q8TC71 538 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 OSCP1Q8WVF1 389 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 NELL1Q92832 810 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 DVL3Q92997 716 aaPredicted RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 ATP2A3Q93084 1043 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 FBXO32Q969P5 355 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 SYAP1Q96A49 352 aaPredicted RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 TRMT2BQ96GJ1 504 aaKnown RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 B3GNT5Q9BYG0 378 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 PRDM14Q9GZV8 571 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 NACA2Q9H009 215 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 ECT2Q9H8V3 914 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 FBRSL1Q9HCM7 1045 aaKnown RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 FAM49BQ9NUQ9 324 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 TMEM30AQ9NV96 361 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 CFAP97Q9P2B7 532 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 RCOR1Q9UKL0 485 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 INVSQ9Y283 1065 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 CPQQ9Y646 472 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.17
SPG11-213ENST00000558988 ATP8B3O60423 1300 aa7.77□□□□□ -1.17
SPG11-213ENST00000558988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.76□□□□□ -1.17
SPG11-213ENST00000558988 LEFTY2O00292 366 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 KIF20AO95235 890 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 NFATC1O95644 943 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 TRIM49P0CI25 452 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 TRIM49CP0CI26 452 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 IRF1P10914 325 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 CCDC130P13994 396 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 MAPK1P28482 360 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 ADORA2BP29275 332 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 GSTT1P30711 240 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 SYKP43405 635 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
SPG11-213ENST00000558988 AMPD2Q01433 879 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 LMNB2Q03252 620 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 KDSRQ06136 332 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 BMT2Q1RMZ1 405 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 C2orf27AQ580R0 203 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 TMEM196Q5HYL7 178 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 ATL3Q6DD88 541 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 SPOPLQ6IQ16 392 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 ERMP1Q7Z2K6 904 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 FILIP1Q7Z7B0 1213 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 MCATQ8IVS2 390 aaKnown RBP7.76□□□□□ -1.17
SPG11-213ENST00000558988 CCDC33Q8N5R6 958 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 GOLGA5Q8TBA6 731 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 CD101Q93033 1021 aa7.76□□□□□ -1.17
SPG11-213ENST00000558988 CCDC47Q96A33 483 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms