RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 TUBP50607 506 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 CASP6P55212 293 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 RPP30P78346 268 aaKnown RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 CDK18Q07002 472 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 KCNB1Q14721 858 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 NFIL3Q16649 462 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 RNASE12Q5GAN4 147 aaKnown RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 TMEM65Q6PI78 240 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 TRIM72Q6ZMU5 477 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 DCDC5Q6ZRR9 648 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 BCDIN3DQ7Z5W3 292 aaKnown RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 ZNF366Q8N895 744 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 LINS1Q8NG48 757 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 MAFAQ8NHW3 353 aaPredicted RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 ADAMTS15Q8TE58 950 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 TBC1D22AQ8WUA7 517 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 ZUFSPQ96AP4 578 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 MASTLQ96GX5 879 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 ZNF845Q96IR2 970 aaPredicted RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 CCDC17Q96LX7 622 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 BBC3Q96PG8 261 aaPredicted RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 FUZQ9BT04 418 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 AGXT2Q9BYV1 514 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 CLPBQ9H078 707 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 STN1Q9H668 368 aaKnown RBP4.86□□□□□ -1.63
CASC4-206ENST00000558847 ACAD9Q9H845 621 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 TBC1D22BQ9NU19 505 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 SEMA5BQ9P283 1151 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 CD207Q9UJ71 328 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 VPS4AQ9UN37 437 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 SPATA31A5Q5VU36 1347 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 SPATA31A7Q8IWB4 1347 aa4.86□□□□□ -1.63
CASC4-206ENST00000558847 TMEM247A6NEH6 219 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 GAGE10A6NGK3 116 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 FYB1O15117 783 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 EXOC3O60645 756 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 GCATO75600 419 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 JTBO76095 146 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 RTN3O95197 1032 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 SGPL1O95470 568 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 MBPP02686 304 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 ACP5P13686 325 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 CAPN3P20807 821 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 TGM2P21980 687 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 BDNFP23560 247 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 FPR3P25089 353 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 NDUFS1P28331 727 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 HOXD12P35452 270 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 AGTR2P50052 363 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 HOXA4Q00056 320 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 MFSD13AQ14CX5 517 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 LARS2Q15031 903 aaKnown RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 TTLL5Q6EMB2 1281 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 KYAT3Q6YP21 454 aaKnown RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 C16orf71Q8IYS4 520 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 TNIP2Q8NFZ5 429 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 ADAMTS18Q8TE60 1221 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 NCSTNQ92542 709 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 PRR11Q96HE9 360 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 TIGD1Q96MW7 591 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 TREX2Q9BQ50 279 aaPredicted RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 INTS2Q9H0H0 1204 aaKnown RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 VEZTQ9HBM0 779 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 THAP1Q9NVV9 213 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 HCN3Q9P1Z3 774 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 SLC17A6Q9P2U8 582 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 SLC25A13Q9UJS0 675 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 HSF4Q9ULV5 492 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 OSGIN2Q9Y236 505 aa4.85□□□□□ -1.63
CASC4-206ENST00000558847 TDRD9Q8NDG6 1382 aaKnown RBP4.85□□□□□ -1.63
CASC4-206ENST00000558847 ANKRD18BA2A2Z9 1011 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 SH2D7A6NKC9 451 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 CLIC1O00299 241 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 CHRM5P08912 532 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 HSPA1AP0DMV8 641 aaKnown RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 HSPA1BP0DMV9 641 aaKnown RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 CYP4B1P13584 511 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 ATP1A3P13637 1013 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 HOXB9P17482 250 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 WT1P19544 449 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 PSMA4P25789 261 aaKnown RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 RARRES1P49788 294 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 GALNT2Q10471 571 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 SEC23BQ15437 767 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 PFKFB3Q16875 520 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 GXYLT1Q4G148 440 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 ZNF362Q5T0B9 420 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 SERPINA13PQ6UXR4 307 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 NAPRTQ6XQN6 538 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 GALNT7Q86SF2 657 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 TBC1D1Q86TI0 1168 aaPredicted RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 UEVLDQ8IX04 471 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 FAM98AQ8NCA5 519 aaKnown RBP4.84□□□□□ -1.63
CASC4-206ENST00000558847 RFWD2Q8NHY2 731 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 NFKBIDQ8NI38 313 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 CAGE1Q8TC20 777 aa4.84□□□□□ -1.63
CASC4-206ENST00000558847 CLEC4CQ8WTT0 213 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms