RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 RFC1P35251 1148 aaPredicted RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 ADRA1BP35368 520 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 PLK1P53350 603 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 CDH4P55283 916 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 SFSWAPQ12872 951 aaKnown RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 TRIM14Q14142 442 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 ZNF234Q14588 700 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 C2CD6Q53TS8 623 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 DNAJC24Q6P3W2 148 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 DCUN1D2Q6PH85 259 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 WDR59Q6PJI9 974 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 SERPINA13PQ6UXR4 307 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 SLC36A4Q6YBV0 504 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 MON1BQ7L1V2 547 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 BNIPLQ7Z465 357 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 CFAP52Q8N1V2 620 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 MDGA1Q8NFP4 955 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 OLIG1Q8TAK6 271 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 HMGB4Q8WW32 186 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 CENPIQ92674 756 aaPredicted RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 TRIM11Q96F44 468 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 P2RY11Q96G91 374 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 CFAP57Q96MR6 1250 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 ACOX2Q99424 681 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 SYT11Q9BT88 431 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 ANP32EQ9BTT0 268 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 MRPL47Q9HD33 250 aaKnown RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 METTL5Q9NRN9 209 aaKnown RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 PIGVQ9NUD9 493 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 CACNA2D2Q9NY47 1150 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 XPO7Q9UIA9 1087 aaKnown RBP8.75□□□□□ -1.01
TPM1-213ENST00000558400 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 PCDHGA5Q9Y5G8 931 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 HS3ST4Q9Y661 456 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 GPR179Q6PRD1 2367 aa8.75□□□□□ -1.01
TPM1-213ENST00000558400 MYO18AQ92614 2054 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 WASH3PC4AMC7 463 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ADCY5O95622 1261 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 EPHX1P07099 455 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 GPD1P21695 349 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 OXTRP30559 389 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 CD70P32970 193 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 P2RY2P41231 377 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 DPP6P42658 865 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 IL12RB1P42701 662 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 WASP42768 502 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 SGSHP51688 502 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ZNF143P52747 638 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 AIF1P55008 147 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ATP11AP98196 1134 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 NRG1Q02297 640 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 ZBTB16Q05516 673 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 LMAN2Q12907 356 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ARID5BQ14865 1188 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 CCDC14Q49A88 953 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 FNDC3BQ53EP0 1204 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 RNF219Q5W0B1 726 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 TMEM215Q68D42 235 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 SPECC1LQ69YQ0 1117 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ZNF571Q7Z3V5 609 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 SETD3Q86TU7 594 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 TMPRSS6Q8IU80 811 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 CCAR2Q8N163 923 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 EMC1Q8N766 993 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 OR8K1Q8NGG5 319 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 CPLX3Q8WVH0 158 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 LMLNQ96KR4 655 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 PRICKLE1Q96MT3 831 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 CNPY3Q9BT09 278 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 XPO4Q9C0E2 1151 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 ISCUQ9H1K1 167 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 OSBPL2Q9H1P3 480 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 TMEM245Q9H330 911 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 PRDM16Q9HAZ2 1276 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 POLR3BQ9NW08 1133 aaPredicted RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 ZNHIT6Q9NWK9 470 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 DONSONQ9NYP3 566 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 PPARGC1AQ9UBK2 798 aaKnown RBP8.74□□□□□ -1.01
TPM1-213ENST00000558400 OR12D3Q9UGF7 316 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 ADAMTS1Q9UHI8 967 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 VANGL2Q9ULK5 521 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 TBC1D30Q9Y2I9 924 aa8.74□□□□□ -1.01
TPM1-213ENST00000558400 IGLV3-10A0A075B6K4 115 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 TCRBV5S1A1TA0A578 114 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 TARSL2A2RTX5 802 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 ANTXRLA6NF34 631 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 EIF3CLB5ME19 914 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 RNASEH1O60930 286 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 SRGAP2O75044 1071 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 RNF8O76064 485 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 ACADMP11310 421 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 SKILP12757 684 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 GABRG2P18507 467 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 TFE3P19532 575 aaPredicted RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 SDHBP21912 280 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 RRM1P23921 792 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 HOXC13P31276 330 aa8.73□□□□□ -1.01
TPM1-213ENST00000558400 HNRNPH3P31942 346 aaKnown RBP8.73□□□□□ -1.01
TPM1-213ENST00000558400 CSKP41240 450 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms