RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PRDM16Q9HAZ2 1276 aa14.1□□□□□ -0.15
SHMT2-234ENST00000557703 DOCK4Q8N1I0 1966 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 KIAA1549LQ6ZVL6 1849 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 SOWAHDA6NJG2 315 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 WASH4PA8MWX3 477 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 I6L893 689 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 PJA2O43164 708 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 LAMTOR5O43504 91 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 PI15O43692 258 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 LRIG2O94898 1065 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 DCNP07585 359 aaKnown RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 DLDP09622 509 aaKnown RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 POLR2EP19388 210 aaKnown RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 OR1E1P30953 314 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 NTSR1P30989 418 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 CXCL12P48061 93 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 DGKEP52429 567 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 VAV2P52735 878 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 SLC20A2Q08357 652 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 ENPP2Q13822 863 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 DPYSL2Q16555 572 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 MAP7D3Q8IWC1 876 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 CARNMT1Q8N4J0 409 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 LZTR1Q8N653 840 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 ARFGAP1Q8N6T3 406 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 CCDC185Q8N715 623 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 ZNF513Q8N8E2 541 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 BHMTQ93088 406 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 IGSF8Q969P0 613 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 LMLNQ96KR4 655 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 TSGA10Q9BZW7 698 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 TRIM7Q9C029 511 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 FBRSQ9HAH7 460 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 ANLNQ9NQW6 1124 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 ABCB8Q9NUT2 735 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 TMEM248Q9NWD8 314 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 THAP10Q9P2Z0 257 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-234ENST00000557703 MMP17Q9ULZ9 603 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 AP4E1Q9UPM8 1137 aa14.09□□□□□ -0.15
SHMT2-234ENST00000557703 FAM170AA1A519 330 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 ZNF487B1APH4 448 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 ZBTB24O43167 697 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 SRGAP2O75044 1071 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 RNF40O75150 1001 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 SRPRAP08240 638 aaKnown RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 NNMTP40261 264 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 ARL4AP40617 200 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 YBEYP58557 167 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 KIF5AQ12840 1032 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 PDK2Q15119 407 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 PLEKHG6Q3KR16 790 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 ZNF662Q6ZS27 426 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 C14orf80Q86SX3 495 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 METTL3Q86U44 580 aaKnown RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 ADIPOR2Q86V24 386 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 EZH1Q92800 747 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 C2orf49Q9BVC5 232 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 MAGEH1Q9H213 219 aa14.08□□□□□ -0.16
SHMT2-234ENST00000557703 PRMT8Q9NR22 394 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-234ENST00000557703 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 PRRT4C9JH25 899 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 C7P10643 843 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 EPHB2P29323 1055 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 NOP2P46087 812 aaKnown RBP14.07□□□□□ -0.16
SHMT2-234ENST00000557703 SGSHP51688 502 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 GEMIN4P57678 1058 aaKnown RBP14.07□□□□□ -0.16
SHMT2-234ENST00000557703 ST8SIA6P61647 398 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 KDSRQ06136 332 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 LMAN2Q12907 356 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 MTAPQ13126 283 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 GEN1Q17RS7 908 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 MBLAC2Q68D91 279 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 C11orf63Q6NUN7 778 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 KIAA1328Q86T90 577 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 NLRP14Q86W24 1093 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 LRRC49Q8IUZ0 686 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 CFAP52Q8N1V2 620 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 RNF10Q8N5U6 811 aaKnown RBP14.07□□□□□ -0.16
SHMT2-234ENST00000557703 IL17RCQ8NAC3 791 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 RPLP0P6Q8NHW5 317 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 FAM71BQ8TC56 605 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 P2RY11Q96G91 374 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 PDLIM2Q96JY6 352 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 GABRG3Q99928 467 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 FEM1AQ9BSK4 669 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 SNRNP25Q9BV90 132 aaKnown RBP14.07□□□□□ -0.16
SHMT2-234ENST00000557703 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 SPATA6Q9NWH7 488 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-234ENST00000557703 ZNF212Q9UDV6 495 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 SUN2Q9UH99 717 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 PCSK1NQ9UHG2 260 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 CLEC4EQ9ULY5 219 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 SLC8A2Q9UPR5 921 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 HCN4Q9Y3Q4 1203 aa14.07□□□□□ -0.16
SHMT2-234ENST00000557703 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-234ENST00000557703 H3BRJ5 948 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 KRT86O43790 486 aa14.06□□□□□ -0.16
SHMT2-234ENST00000557703 ALDH1A2O94788 518 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms