RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 KCNG4Q8TDN1 519 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 TBC1D22AQ8WUA7 517 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 TMEM171Q8WVE6 324 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 MARS2Q96GW9 593 aaKnown RBP5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 ZNF668Q96K58 619 aaPredicted RBP5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 ZBTB45Q96K62 511 aaPredicted RBP5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 HIST1H2AAQ96QV6 131 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 TTPALQ9BTX7 342 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 CDK19Q9BWU1 502 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 CCDC68Q9H2F9 335 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 SMOC2Q9H3U7 446 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 CXorf36Q9H7Y0 433 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 TBC1D29Q9UFV1 150 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 USP22Q9UPT9 525 aa5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 COL3A1P02461 1466 aaPredicted RBP5.38□□□□□ -1.55
MTHFD1-216ENST00000557539 A0A1W2PRQ8 180 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 FAM90A20PA6NIJ5 464 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 B4DLN1 442 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 DHHO43323 396 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 TMEM63AO94886 807 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 SLC3A2P08195 630 aaKnown RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 INHBBP09529 407 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 CSF1P09603 554 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 SPATA31D3P0C874 917 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 ALOX12P18054 663 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 CCT4P50991 539 aaKnown RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 PGDP52209 483 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 BAK1Q16611 211 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 FAM111BQ6SJ93 734 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 SPATA31D4Q6ZUB0 917 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 GPRIN1Q7Z2K8 1008 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 ARMC8Q8IUR7 673 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 ZFPM1Q8IX07 1006 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 MCRS1Q96EZ8 462 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 LRIG1Q96JA1 1093 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 C20orf173Q96LM9 149 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 MECRQ9BV79 373 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 AP1M1Q9BXS5 423 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 TRIM5Q9C035 493 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 PRDM13Q9H4Q3 707 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 RMI1Q9H9A7 625 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 AGO3Q9H9G7 860 aaKnown RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 VSX1Q9NZR4 365 aaPredicted RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 VPS51Q9UID3 782 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 VPS28Q9UK41 221 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 POLQO75417 2590 aa5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 FAM208AQ9UK61 1670 aaKnown RBP5.37□□□□□ -1.55
MTHFD1-216ENST00000557539 CCDC195A0A1B0GUA6 201 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CYP21A2P08686 494 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 AKR1B1P15121 316 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 GNAT2P19087 354 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 PRKAR1BP31321 381 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ACTN2P35609 894 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 GGT5P36269 586 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ZEB1P37275 1124 aaPredicted RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 PAFAH1B1P43034 410 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CCR10P46092 362 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 MCM2P49736 904 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 RPP30P78346 268 aaKnown RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 FHL3Q13643 280 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 SSPNQ14714 243 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ZNF484Q5JVG2 852 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ARHGAP40Q5TG30 622 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 DGAT2L7PQ6IED9 249 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ANO7Q6IWH7 933 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CLEC9AQ6UXN8 241 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 RINLQ6ZS11 566 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 TMTC3Q6ZXV5 915 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 LRRC8DQ7L1W4 858 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CPLX4Q7Z7G2 160 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 TRABD2AQ86V40 505 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 NGEFQ8N5V2 710 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 MBD3L2Q8NHZ7 208 aaPredicted RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ZDHHC12Q96GR4 267 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 RBM17Q96I25 401 aaKnown RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 APOPT1Q96IL0 206 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 NUDT22Q9BRQ3 303 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 PTDSS2Q9BVG9 487 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 PDCL3Q9H2J4 239 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CCDC134Q9H6E4 229 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 NDRG4Q9ULP0 352 aaKnown RBP5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 CAMK2AQ9UQM7 478 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 IRAK3Q9Y616 596 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 ANKRD31Q8N7Z5 1873 aa5.36□□□□□ -1.55
MTHFD1-216ENST00000557539 DAPK1P53355 1430 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 PMS2P1A4D2B8 440 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 AGPSO00116 658 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 MATN2O00339 956 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 AP3D1O14617 1153 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 PTP4A3O75365 173 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 LARGE1O95461 756 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 ITGALP20701 1170 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 HOXA5P20719 270 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 GCSHP23434 173 aa5.35□□□□□ -1.55
MTHFD1-216ENST00000557539 RBL1P28749 1068 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms