RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 DEUP1Q05D60 604 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 ZNF177Q13360 481 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 AUHQ13825 339 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 ARID5BQ14865 1188 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 SYCP1Q15431 976 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 HNRNPA1L2Q32P51 320 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 UAP1L1Q3KQV9 507 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 PLEKHG6Q3KR16 790 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 FSCBQ5H9T9 825 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 BRMS1LQ5PSV4 323 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 ZNF776Q68DI1 518 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 FBXL22Q6P050 247 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 LRRC31Q6UY01 552 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 NOP9Q86U38 636 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 CACUL1Q86Y37 369 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 XYLT1Q86Y38 959 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 CCAR2Q8N163 923 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 HDDC3Q8N4P3 179 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 ZNF366Q8N895 744 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 EPS8L1Q8TE68 723 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 CPA5Q8WXQ8 436 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 PGAP3Q96FM1 320 aaPredicted RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 NPY6RQ99463 290 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 PRMT1Q99873 361 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 BTBD1Q9H0C5 482 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 GANQ9H2C0 597 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 SLC32A1Q9H598 525 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 NLRC4Q9NPP4 1024 aa11.14□□□□□ -0.63
XRCC3-216ENST00000556682 LIMA1Q9UHB6 759 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 INTS6Q9UL03 887 aaKnown RBP11.14□□□□□ -0.63
XRCC3-216ENST00000556682 DMXL1Q9Y485 3027 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 EDDM13A0A1B0GTR0 161 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 A0A1B0GTW7 788 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 LGALS16A8MUM7 142 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 GOLGA8SH3BPF8 625 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 ARHGAP33O14559 1287 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 OPHN1O60890 802 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 PAGE1O75459 146 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CLDN11O75508 207 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 MMEP08473 750 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CCDC172P0C7W6 258 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 C7P10643 843 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 PDGFRAP16234 1089 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 ZNF18P17022 549 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CSRP1P21291 193 aaKnown RBP11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CXCR3P49682 368 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 NOVA1P51513 510 aaKnown RBP11.13□□□□□ -0.63
XRCC3-216ENST00000556682 PLK1P53350 603 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CDH4P55283 916 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 RPS14P62263 151 aaKnown RBP11.13□□□□□ -0.63
XRCC3-216ENST00000556682 SLC25A52Q3SY17 297 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 DCAF12L1Q5VU92 463 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 NAA35Q5VZE5 725 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 TRIM72Q6ZMU5 477 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 MMS22LQ6ZRQ5 1243 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 USP30Q70CQ3 517 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 ARCQ7LC44 396 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 FAM124AQ86V42 546 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 GANCQ8TET4 914 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 DNASE2BQ8WZ79 361 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 NT5C3BQ969T7 300 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 MYEOVQ96EZ4 313 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 GTPBP2Q9BX10 602 aaKnown RBP11.13□□□□□ -0.63
XRCC3-216ENST00000556682 ZDHHC5Q9C0B5 715 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 TKTL2Q9H0I9 626 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 MIR1-1HGQ9H1L0 117 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 RSPH9Q9H1X1 276 aaPredicted RBP11.13□□□□□ -0.63
XRCC3-216ENST00000556682 SGK2Q9HBY8 427 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CAPN10Q9HC96 672 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 CD93Q9NPY3 652 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 ARHGEF38Q9NXL2 777 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 HS3ST4Q9Y661 456 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 THADAQ6YHU6 1953 aa11.13□□□□□ -0.63
XRCC3-216ENST00000556682 SMTNL1A8MU46 457 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 BCAT2O15382 392 aaPredicted RBP11.12□□□□□ -0.63
XRCC3-216ENST00000556682 CEACAM1P13688 526 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 MAOBP27338 520 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 NSFP46459 744 aaKnown RBP11.12□□□□□ -0.63
XRCC3-216ENST00000556682 KLK7P49862 253 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 JAM2P57087 298 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 NOMO3P69849 1222 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 TYRO3Q06418 890 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 DHX40Q8IX18 779 aaKnown RBP11.12□□□□□ -0.63
XRCC3-216ENST00000556682 APCDD1Q8J025 514 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 SNX19Q92543 992 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 MYO19Q96H55 970 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 MRGPRX3Q96LB0 322 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 C1orf74Q96LT6 269 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 ERGIC2Q96RQ1 377 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 TBCBQ99426 244 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 PIGVQ9NUD9 493 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 SLC25A13Q9UJS0 675 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 NOCTQ9UK39 431 aaKnown RBP11.12□□□□□ -0.63
XRCC3-216ENST00000556682 SIK3Q9Y2K2 1263 aa11.12□□□□□ -0.63
XRCC3-216ENST00000556682 ITIH6Q6UXX5 1313 aa11.11□□□□□ -0.63
XRCC3-216ENST00000556682 DCHS1Q96JQ0 3298 aa11.11□□□□□ -0.63
XRCC3-216ENST00000556682 TTC34A8MYJ7 566 aa11.11□□□□□ -0.63
XRCC3-216ENST00000556682 SIN3BO75182 1162 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms