RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SLC2A3P11169 496 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 ECT2LQ008S8 904 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 SFSWAPQ12872 951 aaKnown RBP23.35■■□□□ 1.33
ACTN1-220ENST00000556433 EIF4EBP2Q13542 120 aaPredicted RBP23.35■■□□□ 1.33
ACTN1-220ENST00000556433 ARID5BQ14865 1188 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 TEAD4Q15561 434 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 KIF19Q2TAC6 998 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 RNF219Q5W0B1 726 aaPredicted RBP23.35■■□□□ 1.33
ACTN1-220ENST00000556433 USP30Q70CQ3 517 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 NOX5Q96PH1 765 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 SLC2A13Q96QE2 648 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 TM9SF3Q9HD45 589 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 OSGEPQ9NPF4 335 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 ASNSD1Q9NWL6 643 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 DDIT4Q9NX09 232 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 COX16Q9P0S2 106 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 DNAJC12Q9UKB3 198 aa23.35■■□□□ 1.33
ACTN1-220ENST00000556433 FNDC3AQ9Y2H6 1198 aaKnown RBP23.35■■□□□ 1.33
ACTN1-220ENST00000556433 HSF2BPO75031 334 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 GRAP2O75791 330 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 ABCB4P21439 1286 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 CD27P26842 260 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 CST6Q15828 149 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 OR6B2Q6IFH4 312 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 C11orf57Q6ZUT1 292 aaPredicted RBP23.34■■□□□ 1.33
ACTN1-220ENST00000556433 MMAAQ8IVH4 418 aaKnown RBP23.34■■□□□ 1.33
ACTN1-220ENST00000556433 RPL10LQ96L21 214 aaKnown RBP23.34■■□□□ 1.33
ACTN1-220ENST00000556433 SIX2Q9NPC8 291 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 AJAP1Q9UKB5 411 aaPredicted RBP23.34■■□□□ 1.33
ACTN1-220ENST00000556433 PCOLCE2Q9UKZ9 415 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 SNX11Q9Y5W9 270 aa23.34■■□□□ 1.33
ACTN1-220ENST00000556433 EDDM13A0A1B0GTR0 161 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 FAM47DPA6NHR8 397 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 FOXN3O00409 490 aaPredicted RBP23.33■■□□□ 1.33
ACTN1-220ENST00000556433 MID1O15344 667 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 CCR1P32246 355 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 KRT9P35527 623 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 KIAA0895LQ68EN5 471 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 FAM183BPQ6ZVS7 135 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 RAB44Q7Z6P3 723 aaPredicted RBP23.33■■□□□ 1.33
ACTN1-220ENST00000556433 CIR1Q86X95 450 aaPredicted RBP23.33■■□□□ 1.33
ACTN1-220ENST00000556433 C1orf131Q8NDD1 294 aaKnown RBP23.33■■□□□ 1.33
ACTN1-220ENST00000556433 FAM129BQ96TA1 746 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 PRMT1Q99873 361 aaKnown RBP23.33■■□□□ 1.33
ACTN1-220ENST00000556433 OMDQ99983 421 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 NEUROG2Q9H2A3 272 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 CHMP5Q9NZZ3 219 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 ANKRD6Q9Y2G4 727 aa23.33■■□□□ 1.33
ACTN1-220ENST00000556433 A0A1W2PP55 124 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 TMEM8BA6NDV4 472 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 CBFA2T3O75081 653 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 FTH1P19P0C7X4 201 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 PDGFRAP16234 1089 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SLC8A1P32418 973 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 CLCN1P35523 988 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 NNMTP40261 264 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 NUMBP49757 651 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 GALCP54803 685 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SNX16P57768 344 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SLC12A1Q13621 1099 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 MAN2A1Q16706 1144 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 RABGAP1LQ5R372 815 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SMYD5Q6GMV2 418 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SLC47A2Q86VL8 602 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 FAM114A1Q8IWE2 563 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 CCAR2Q8N163 923 aaKnown RBP23.32■■□□□ 1.32
ACTN1-220ENST00000556433 PNPLA1Q8N8W4 532 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SYNCQ9H7C4 482 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 SERGEFQ9UGK8 458 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 ITIH6Q6UXX5 1313 aa23.32■■□□□ 1.32
ACTN1-220ENST00000556433 FAM221BA6H8Z2 402 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 KCNK3O14649 394 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 RNASEH2AO75792 299 aaKnown RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 ERBB2P04626 1255 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 IGHV4-34P06331 123 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 MZF1P28698 734 aaPredicted RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 GRIA4P48058 902 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 STK19P49842 368 aaPredicted RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 NME3Q13232 169 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 SUZ12Q15022 739 aaKnown RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 TTC39BQ5VTQ0 682 aaPredicted RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 FBXL22Q6P050 247 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 STK40Q8N2I9 435 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 PTPRN2Q92932 1015 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 ORAI3Q9BRQ5 295 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 CLSTN2Q9H4D0 955 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 APOBEC2Q9Y235 224 aaKnown RBP23.31■■□□□ 1.32
ACTN1-220ENST00000556433 PCDHGB2Q9Y5G2 931 aa23.31■■□□□ 1.32
ACTN1-220ENST00000556433 A0A1B0GVM2 712 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 TCAF2A6NFQ2 919 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 PNMA6AP0CW24 399 aaPredicted RBP23.3■■□□□ 1.32
ACTN1-220ENST00000556433 PRKCSHP14314 528 aaPredicted RBP23.3■■□□□ 1.32
ACTN1-220ENST00000556433 PSMD8P48556 350 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 PLK1P53350 603 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 OXCT1P55809 520 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 SLC6A3Q01959 620 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 SULT2A1Q06520 285 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 AUHQ13825 339 aaKnown RBP23.3■■□□□ 1.32
ACTN1-220ENST00000556433 VWA3BQ502W6 1294 aa23.3■■□□□ 1.32
ACTN1-220ENST00000556433 NCEH1Q6PIU2 408 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms