RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 RAMP2O60895 175 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ECI2O75521 394 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NEBLO76041 1014 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NFATC1O95644 943 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ADH1CP00326 375 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ITGAVP06756 1048 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 TUBBP07437 444 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 LAMP2P13473 410 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 KCNA5P22460 613 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MCM3P25205 808 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 OTUD4Q01804 1114 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 GAD2Q05329 585 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF33AQ06730 810 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 DLX2Q07687 328 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 C2orf54Q08AI8 447 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 SNX1Q13596 522 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 POLD3Q15054 466 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 PARP15Q460N3 678 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 PREPLQ4J6C6 727 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 FAM133BQ5BKY9 247 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 TMCO4Q5TGY1 634 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NCBP2-AS2Q69YL0 99 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 TIGD7Q6NT04 549 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 C8orf74Q6P047 294 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 RFWD3Q6PCD5 774 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MFSD6LQ8IWD5 586 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 BBS7Q8IWZ6 715 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF683Q8IZ20 524 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 UMODL1-AS1Q8N2C9 162 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 PRELID2Q8N945 189 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 CCDC89Q8N998 374 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 CCNYQ8ND76 341 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ADAMTS19Q8TE59 1207 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 OSCP1Q8WVF1 389 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 C1orf54Q8WWF1 131 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 PPM1EQ8WY54 764 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 SUSD6Q92537 303 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 IRF7Q92985 503 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NKD2Q969F2 451 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 IGSF8Q969P0 613 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 NXPE3Q969Y0 559 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 EXOC4Q96A65 974 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ELSPBP1Q96BH3 223 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 CCDC114Q96M63 670 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 XPO6Q96QU8 1125 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MAGEB5Q9BZ81 275 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 RAB17Q9H0T7 212 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MAGEH1Q9H213 219 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 SMARCAL1Q9NZC9 954 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MPP6Q9NZW5 540 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 EPS15L1Q9UBC2 864 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 CCL26Q9Y258 94 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 UTP11Q9Y3A2 253 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 USP15Q9Y4E8 981 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 LAMA3Q16787 3333 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 MYO16Q9Y6X6 1858 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 COL4A4P53420 1690 aaPredicted RBP9.46□□□□□ -0.89
ACTN1-218ENST00000556343 PRRC2BQ5JSZ5 2229 aaKnown RBP9.46□□□□□ -0.89
ACTN1-218ENST00000556343 TCRBV7S2A1N4TA0A589 114 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ILVBLA1L0T0 632 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 BCLAF3A2AJT9 711 aaKnown RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 H3BQ06 376 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SGK1O00141 431 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 DFFAO00273 331 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 LIASO43766 372 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 GREM1O60565 184 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 PRAMEF12O95522 483 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ECEL1O95672 775 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 RHOCP08134 193 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 RBP3P10745 1247 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SLC6A4P31645 630 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 GGCXP38435 758 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 VCPP55072 806 aaKnown RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 DR1Q01658 176 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 AP1B1Q10567 949 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SLC12A1Q13621 1099 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 CDH18Q13634 790 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 PPP1R7Q15435 360 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SIX1Q15475 284 aaPredicted RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ANO4Q32M45 955 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 HEATR6Q6AI08 1181 aaKnown RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 Q7L0L9 218 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ANKS1BQ7Z6G8 1248 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 TFAP2DQ7Z6R9 452 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ZC3H18Q86VM9 953 aaKnown RBP9.46□□□□□ -0.9
ACTN1-218ENST00000556343 NLRP14Q86W24 1093 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 MFN1Q8IWA4 741 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ADGRG2Q8IZP9 1017 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 CFAP52Q8N1V2 620 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 BBS5Q8N3I7 341 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 CARNMT1Q8N4J0 409 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ATPAF2Q8N5M1 289 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 ATP2A3Q93084 1043 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 MYADMQ96S97 322 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SLC2A11Q9BYW1 496 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 POMKQ9H5K3 350 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 SPHK2Q9NRA0 654 aa9.46□□□□□ -0.9
ACTN1-218ENST00000556343 RBM12Q9NTZ6 932 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms