RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 POU5F1Q01860 360 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 XRCC4Q13426 336 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 DDR2Q16832 855 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZBTB49Q6ZSB9 765 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ARCQ7LC44 396 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LRRC34Q8IZ02 419 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 USP6NLQ92738 828 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 SLC35C1Q96A29 364 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 IRX2Q9BZI1 471 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 RACGAP1Q9H0H5 632 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 KLK14Q9P0G3 267 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LOC100653049A0A140TA62 436 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PIPSLA2A3N6 862 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 KRT34O76011 436 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 STAT5AP42229 794 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 SCNN1BP51168 640 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PRMT2P55345 433 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ERVK-9P63128 1117 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 RASA2Q15283 850 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZNHIT3Q15649 155 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 KLHL35Q6PF15 583 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM26Q6ZUK4 368 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF571Q7Z3V5 609 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 VSIG10LQ86VR7 867 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PACSIN1Q9BY11 444 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TRIT1Q9H3H1 467 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 GPRC5DQ9NZD1 345 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 GNPTGQ9UJJ9 305 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 RWDD3Q9Y3V2 267 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 LRRIQ1Q96JM4 1722 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TBKBP1A7MCY6 615 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 FTH1P02794 183 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 MMP13P45452 471 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 GTF2BQ00403 316 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ITGADQ13349 1161 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 CRYMQ14894 314 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 NFIL3Q16649 462 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 CLEC10AQ8IUN9 316 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 PPP3R2Q96LZ3 170 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ZNF670Q9BS34 389 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 HTATIP2Q9BUP3 242 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 ADI1Q9BV57 179 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 BBS2Q9BXC9 721 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 FANCEQ9HB96 536 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 SLC40A1Q9NP59 571 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 A1CFQ9NQ94 594 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TSR3Q9UJK0 312 aaKnown RBP10.93□□□□□ -0.66
ACTN1-216ENST00000556083 RPS6KA6Q9UK32 745 aa10.93□□□□□ -0.66
ACTN1-216ENST00000556083 TRAV19A0A0A6YYK7 116 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 MEI4A8MW99 385 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 E9PBE3 544 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ATMINO43313 823 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SLITRK3O94933 977 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 CCNDBP1O95273 360 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 MED26O95402 600 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 FGFR1P11362 822 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ATP6V1C1P21283 382 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 YY1P25490 414 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SERPINB5P36952 375 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 TRIM16LQ309B1 348 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 RFX4Q33E94 735 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 NOA1Q8NC60 698 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 FBXO25Q8TCJ0 367 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 OSMRQ99650 979 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 NOD2Q9HC29 1040 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 MRPL17Q9NRX2 175 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 OPTCQ9UBM4 332 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 MSRAQ9UJ68 235 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 RAB21Q9UL25 225 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SPATA31D1Q6ZQQ2 1576 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 IRGMA1A4Y4 181 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 CXCL8P10145 99 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 AQP5P55064 265 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ACSM2AQ08AH3 577 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ST3GAL1Q11201 340 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 DDX39BQ13838 428 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 CEP78Q5JTW2 689 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 HECTD3Q5T447 861 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ACSM2BQ68CK6 577 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 R3HCC1LQ7Z5L2 792 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 FGD2Q7Z6J4 655 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 MILR1Q7Z6M3 343 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 PSTKQ8IV42 348 aaKnown RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ADHFE1Q8IWW8 467 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 HJURPQ8NCD3 748 aaPredicted RBP10.92□□□□□ -0.66
ACTN1-216ENST00000556083 SERAC1Q96JX3 654 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 Q96MT0 163 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 DNMT3LQ9UJW3 386 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 ITGB1BP2Q9UKP3 347 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 BCL9O00512 1426 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 A0A0A0MRY4 1105 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 PRR23AA6NEV1 266 aa10.92□□□□□ -0.66
ACTN1-216ENST00000556083 PDE9AO76083 593 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms