RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NCBP2-AS2Q69YL0 99 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 KCNT2Q6UVM3 1135 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 LRRC31Q6UY01 552 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 RFX8Q6ZV50 586 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 TAOK1Q7L7X3 1001 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 TADA2BQ86TJ2 420 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 FAM131BQ86XD5 332 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SPATA2LQ8IUW3 424 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 DBF4BQ8NFT6 615 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SLC7A14Q8TBB6 771 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 EPS8L3Q8TE67 593 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 RNF139Q8WU17 664 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 LRRC39Q96DD0 335 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 PWWP2AQ96N64 755 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 CASD1Q96PB1 797 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 FAM193BQ96PV7 902 aaPredicted RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 FERMT1Q9BQL6 677 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 MRPL9Q9BYD2 267 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 EPN3Q9H201 632 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ARHGEF4Q9NR80 690 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 ABCC13Q9NSE7 274 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 COMMD8Q9NX08 183 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 DTLQ9NZJ0 730 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 SLC24A2Q9UI40 661 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 XPO7Q9UIA9 1087 aaKnown RBP8.56□□□□□ -1.04
ATXN3-235ENST00000556082 TRIM17Q9Y577 477 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 HEY1Q9Y5J3 304 aa8.56□□□□□ -1.04
ATXN3-235ENST00000556082 DCDC2CA8MYV0 355 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 DCLK1O15075 740 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 TADA2AO75478 443 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ALDH2P05091 517 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 GSTA2P09210 222 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 NCAM1P13591 858 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 GOT1P17174 413 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 TPSB2P20231 275 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 YY1P25490 414 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PHBP35232 272 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 MAGEA3P43357 314 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 OR1G1P47890 313 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PITX1P78337 314 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ZNF33AQ06730 810 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PDIA2Q13087 525 aaKnown RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 NME3Q13232 169 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PRKD1Q15139 912 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 TPSAB1Q15661 275 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 CCDC38Q502W7 563 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PAN2Q504Q3 1202 aaKnown RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 BRMS1LQ5PSV4 323 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 UBAP2Q5T6F2 1119 aaKnown RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 EXOC3L1Q86VI1 746 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ALDH16A1Q8IZ83 802 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ABI1Q8IZP0 508 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 CNPY4Q8N129 248 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 MICALL1Q8N3F8 863 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ATP11CQ8NB49 1132 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 PYROXD1Q8WU10 500 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 TFB1MQ8WVM0 346 aaKnown RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 HTR3CQ8WXA8 447 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 MAML1Q92585 1016 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 C9orf72Q96LT7 481 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 CEP295NLQ96MC4 621 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 HAPLN3Q96S86 360 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 SLC30A3Q99726 388 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 DHRS4Q9BTZ2 278 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 C2orf49Q9BVC5 232 aaPredicted RBP8.55□□□□□ -1.04
ATXN3-235ENST00000556082 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 KLC2Q9H0B6 622 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 CCDC134Q9H6E4 229 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 C10orf88Q9H8K7 445 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 DDIT4Q9NX09 232 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 ARHGEF38Q9NXL2 777 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 SCML2Q9UQR0 700 aa8.55□□□□□ -1.04
ATXN3-235ENST00000556082 A0A0A0MRY4 1105 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 FAM92AA1XBS5 289 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 H7C4K7 107 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 M0R082 166 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 EEF2KO00418 725 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 TRDMT1O14717 391 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 PPP1R12AO14974 1030 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 MTSS1O43312 755 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 TBC1D4O60343 1298 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 OPHN1O60890 802 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 STK10O94804 968 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 TMEM63AO94886 807 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 EFEMP2O95967 443 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 MLNP12872 115 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ATP2A2P16615 1042 aaKnown RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 HPDP32754 393 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 FDFT1P37268 417 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 GRIK1P39086 918 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 GPX6P59796 221 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 YWHAGP61981 247 aaKnown RBP eCLIP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 GUCY1A3Q02108 690 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
ATXN3-235ENST00000556082 SEMA5AQ13591 1074 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 PPP2R5DQ14738 602 aa8.54□□□□□ -1.04
ATXN3-235ENST00000556082 ZSCAN26Q16670 478 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms