RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CAVIN2O95810 425 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 F9P00740 461 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 EPHX1P07099 455 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 KRT3P12035 628 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 TNFAIP3P21580 790 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 RRM1P23921 792 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 RDXP35241 583 aaKnown RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 PRKCIP41743 596 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 HDAC4P56524 1084 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 RPL7AP62424 266 aaKnown RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 TPM4P67936 248 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 OGDHQ02218 1023 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 SF3A2Q15428 464 aaKnown RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 PLEKHG6Q3KR16 790 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 FIGNQ5HY92 759 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 PPP1R15BQ5SWA1 713 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 HGSNATQ68CP4 663 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 TMEFF1Q8IYR6 380 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 DEFB119Q8N690 84 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 C3orf20Q8ND61 904 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 CPLX3Q8WVH0 158 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 CENPIQ92674 756 aaPredicted RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 XPO4Q9C0E2 1151 aaKnown RBP14.1□□□□□ -0.15
SNX6-203ENST00000555416 SEMA4GQ9NTN9 838 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 MPP6Q9NZW5 540 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 SLCO3A1Q9UIG8 710 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 CYP8B1Q9UNU6 501 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 OR51B4Q9Y5P0 310 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 LAMA1P25391 3075 aa14.1□□□□□ -0.15
SNX6-203ENST00000555416 GON4LQ3T8J9 2241 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 SIGLEC16A6NMB1 481 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 DRGXA6NNA5 263 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 TTC34A8MYJ7 566 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 FAM72CH0Y354 149 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 GYPCP04921 128 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 CALB1P05937 261 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 PTGER3P43115 390 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 PTPN9P43378 593 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 STK19P49842 368 aaPredicted RBP14.09□□□□□ -0.15
SNX6-203ENST00000555416 KLHL30Q0D2K2 578 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 CAMK2GQ13555 558 aaPredicted RBP14.09□□□□□ -0.15
SNX6-203ENST00000555416 STARD3Q14849 445 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 RABGAP1LQ5R372 815 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 FAM72AQ5TYM5 149 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 TCEAL6Q6IPX3 200 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 FAM72DQ6L9T8 149 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 LRSAM1Q6UWE0 723 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 SND1Q7KZF4 910 aaKnown RBP eCLIP14.09□□□□□ -0.15
SNX6-203ENST00000555416 ARMCX6Q7L4S7 300 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 FAM72BQ86X60 149 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 TMPRSS6Q8IU80 811 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 CCDC185Q8N715 623 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 RNF214Q8ND24 703 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 TCEAL3Q969E4 200 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 LOXL4Q96JB6 756 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 RPL10LQ96L21 214 aaKnown RBP14.09□□□□□ -0.15
SNX6-203ENST00000555416 MCEEQ96PE7 176 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 SELENOOQ9BVL4 669 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 EDEM3Q9BZQ6 932 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 TSPY26PQ9H489 355 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 PRSS16Q9NQE7 514 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 RXFP3Q9NSD7 469 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 KIAA1522Q9P206 1035 aaPredicted RBP14.09□□□□□ -0.15
SNX6-203ENST00000555416 ZNF212Q9UDV6 495 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 USP18Q9UMW8 372 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 PLA2G4CQ9UP65 541 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 ERVW-1Q9UQF0 538 aa14.09□□□□□ -0.15
SNX6-203ENST00000555416 RALGAPA1Q6GYQ0 2036 aa14.08□□□□□ -0.15
SNX6-203ENST00000555416 IGLV3-10A0A075B6K4 115 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 BCLAF3A2AJT9 711 aaKnown RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 E9PAM4 449 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 CCP110O43303 1012 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 GDF9O60383 454 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 SYNCRIPO60506 623 aaKnown RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 RHOBTB1O94844 696 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 ATP5BP06576 529 aaKnown RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 PLEKP08567 350 aaPredicted RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 CCDC172P0C7W6 258 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 VAV1P15498 845 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 SDC4P31431 198 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 MPLP40238 635 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 CREB5Q02930 508 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 ELF2Q15723 593 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 TTC39BQ5VTQ0 682 aaPredicted RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 DNAJC24Q6P3W2 148 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 TFAP2DQ7Z6R9 452 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 SLC41A1Q8IVJ1 513 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 FAM172AQ8WUF8 416 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 HAPLN3Q96S86 360 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 FEM1AQ9BSK4 669 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 TRIM7Q9C029 511 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 PRDM16Q9HAZ2 1276 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 USP36Q9P275 1121 aaKnown RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 TBC1D30Q9Y2I9 924 aa14.08□□□□□ -0.16
SNX6-203ENST00000555416 TNRC6BQ9UPQ9 1833 aaKnown RBP14.08□□□□□ -0.16
SNX6-203ENST00000555416 A0A1W2PQJ5 194 aa14.07□□□□□ -0.16
SNX6-203ENST00000555416 PATE3B3GLJ2 98 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms