RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PPP2R5EQ16537 467 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 SLC44A4Q53GD3 710 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ALFQ53S48 1182 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 C6orf118Q5T5N4 469 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ZNF783Q6ZMS7 281 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 MFN1Q8IWA4 741 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 SLC35F6Q8N357 371 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 LZTR1Q8N653 840 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ALG3Q92685 438 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 BHMTQ93088 406 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 P2RY11Q96G91 374 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 TLR10Q9BXR5 811 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CARD9Q9H257 536 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ARHGEF4Q9NR80 690 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 PLK2Q9NYY3 685 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 MPP6Q9NZW5 540 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 DEC1Q9P2X7 70 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 PACSIN2Q9UNF0 486 aaPredicted RBP16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 COL4A2P08572 1712 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 MAN2B1O00754 1011 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 TULP3O75386 442 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CNTN5O94779 1100 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 TUBB4AP04350 444 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CD48P09326 243 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ERCC2P18074 760 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 OR1E1P30953 314 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ETFBP38117 255 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CDKN2BP42772 138 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ANKRD20A8PQ5CZ79 823 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 TFDP3Q5H9I0 405 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 SPOCD1Q6ZMY3 1216 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 NUDT18Q6ZVK8 323 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ZSCAN30Q86W11 494 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 CARNMT1Q8N4J0 409 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 SHDQ96IW2 340 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 HEBP1Q9NRV9 189 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 KLHL11Q9NVR0 708 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 KIAA1522Q9P206 1035 aaPredicted RBP16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 MUTYHQ9UIF7 546 aa16.91■□□□□ 0.3
SPTLC2-203ENST00000554901 ILVBLA1L0T0 632 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 PI4K2BG5E9Z4 385 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 ZFXP17010 805 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 SERPINB6P35237 376 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 OPRD1P41143 372 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 DGKGP49619 791 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 IRAK1P51617 712 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 YBEYP58557 167 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 ETF1P62495 437 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 TFDP2Q14188 446 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 DMC1Q14565 340 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 MLF2Q15773 248 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 TMCO3Q6UWJ1 677 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 MFSD7Q6UXD7 560 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 TFAP2DQ7Z6R9 452 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 CIR1Q86X95 450 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 UMODL1-AS1Q8N2C9 162 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 C17orf53Q8N3J3 647 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 RNF25Q96BH1 459 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 CHFRQ96EP1 664 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 NECAB3Q96P71 396 aaPredicted RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 PNKPQ96T60 521 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 MAK16Q9BXY0 300 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 DNAJC17Q9NVM6 304 aaKnown RBP16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 TICRRQ7Z2Z1 1910 aa16.9■□□□□ 0.3
SPTLC2-203ENST00000554901 A0A0A0MRY4 1105 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 DCLK1O15075 740 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 CISD3P0C7P0 127 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 NDST2P52849 883 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 MMRN1Q13201 1228 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 SLC9A4Q6AI14 798 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 GRAMD4Q6IC98 578 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 CXorf57Q6NSI4 855 aaKnown RBP16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 KIAA0907Q7Z7F0 614 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 CCDC50Q8IVM0 306 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 NAT16Q8N8M0 369 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 PCDH19Q8TAB3 1148 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 TTC8Q8TAM2 541 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 WFIKKN2Q8TEU8 576 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 P2RY13Q9BPV8 354 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 MAGEH1Q9H213 219 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 ARHGEF3Q9NR81 526 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 DOCK4Q8N1I0 1966 aa16.89■□□□□ 0.29
SPTLC2-203ENST00000554901 COL4A3Q01955 1670 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 hCG_1818297A0A087WSY0 165 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 CXorf51AA0A1B0GTR3 108 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 RAMP2O60895 175 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 PYGMP11217 842 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 AMPD1P23109 780 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 HLA-FP30511 346 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 DEKP35659 375 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 GRIA2P42262 883 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 PLK1P53350 603 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 ZXDAP98168 799 aa16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 EIF4HQ15056 248 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 PAFAH1B3Q15102 231 aaKnown RBP16.88■□□□□ 0.29
SPTLC2-203ENST00000554901 E2F5Q15329 346 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms