RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 FUT11Q495W5 492 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 ARHGAP40Q5TG30 622 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 HES3Q5TGS1 186 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 KRT79Q5XKE5 535 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 SLC39A4Q6P5W5 647 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 USP49Q70CQ1 688 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 KCNK18Q7Z418 384 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 ATG4DQ86TL0 474 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 OSTM1Q86WC4 334 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 ERICH1Q86X53 443 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 TMPRSS6Q8IU80 811 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 BBS7Q8IWZ6 715 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 IGSF22Q8N9C0 903 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 LRRN4CLQ8ND94 238 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 GRIN3AQ8TCU5 1115 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 SIPA1Q96FS4 1042 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 MED8Q96G25 268 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 XPO6Q96QU8 1125 aaKnown RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 RAB34Q9BZG1 259 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 MKRN2Q9H000 416 aaKnown RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 DNAJC17Q9NVM6 304 aaKnown RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 GDAP2Q9NXN4 497 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 LARSQ9P2J5 1176 aaKnown RBP7.26□□□□□ -1.25
ATXN3-224ENST00000554040 SH3BP1Q9Y3L3 701 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 SLCO1B1Q9Y6L6 691 aa7.26□□□□□ -1.25
ATXN3-224ENST00000554040 TEP1Q99973 2627 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 LRRK2Q5S007 2527 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 HCRTO43612 131 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 DFNA5O60443 496 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ATP2C2O75185 946 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 REC8O95072 547 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 LDOC1O95751 146 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 CISD3P0C7P0 127 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ANXA13P27216 316 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 POLR2BP30876 1174 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF132P52740 706 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 UCNP55089 124 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 TMPRSS3P57727 454 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 NOP14P78316 857 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 TRIM29Q14134 588 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 STARD3Q14849 445 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 MAPRE1Q15691 268 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 BROXQ5VW32 411 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 TDRD10Q5VZ19 366 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ADALQ6DHV7 355 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 FBXL19Q6PCT2 694 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ADGRF2Q8IZF7 708 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF248Q8NDW4 579 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 SNRNP27Q8WVK2 155 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 CNDP2Q96KP4 475 aaKnown RBP7.25□□□□□ -1.25
ATXN3-224ENST00000554040 LGMNQ99538 433 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 TM9SF3Q9HD45 589 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 PPP4R2Q9NY27 417 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 KCND2Q9NZV8 630 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 CDH9Q9ULB4 789 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 AGAP1Q9UPQ3 857 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 STON1Q9Y6Q2 735 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 ANAPC1Q9H1A4 1944 aa7.25□□□□□ -1.25
ATXN3-224ENST00000554040 RELNP78509 3460 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NBASA2RRP1 2371 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 OBSL1O75147 1896 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NPHP3-ACAD11A0A0J9YXS1 232 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 A0A1B0GTQ1 180 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 PP2D1A8MPX8 630 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ANKRD63C9JTQ0 380 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NEDD8-MDP1E9PL57 170 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 F8VP50 259 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CBX4O00257 560 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 NPC1O15118 1278 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 COCHO43405 550 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 EPB41L2O43491 1005 aaKnown RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CACNG3O60359 315 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 PLA2G4BP0C869 781 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 TYRP14679 529 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 PLCG1P19174 1290 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 LMO2P25791 158 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CTSKP43235 329 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ACADVLP49748 655 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SLC12A3P55017 1021 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 IL9RQ01113 521 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 DNAJC3Q13217 504 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ILKQ13418 452 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ENPP2Q13822 863 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SOWAHAQ2M3V2 549 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ARSHQ5FYA8 562 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 KCNT1Q5JUK3 1230 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 TTC38Q5R3I4 469 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 HECTD3Q5T447 861 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 ZNF648Q5T619 568 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SCARA3Q6AZY7 606 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SLFN12LQ6IEE8 588 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CRELD2Q6UXH1 353 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-224ENST00000554040 DPH6Q7L8W6 267 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 LIMS2Q7Z4I7 341 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 SKAP1Q86WV1 359 aa7.24□□□□□ -1.25
ATXN3-224ENST00000554040 CSGALNACT2Q8N6G5 542 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms