RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 CLIC5Q9NZA1 410 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 IFNKQ9P0W0 207 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 FTSJ1Q9UET6 329 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 HMGXB4Q9UGU5 601 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 DNMT3LQ9UJW3 386 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 MYO6Q9UM54 1294 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 PCDHB4Q9Y5E5 795 aa8.05□□□□□ -1.12
ABCD4-220ENST00000553998 PTPRQQ9UMZ3 2332 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ITIH6Q6UXX5 1313 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ENC1O14682 589 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 RFPL3O75679 317 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SEMA4FO95754 770 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 IGHV4-34P06331 123 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 EPHX1P07099 455 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 VDRP11473 427 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 RARGP13631 454 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 STAT1P42224 750 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ACADVLP49748 655 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 PSEN1P49768 467 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 KIF11P52732 1056 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 MAP3K7CLP57077 242 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 POLR2FP61218 127 aaKnown RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 RACK1P63244 317 aaKnown RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 COG7P83436 770 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SEMG2Q02383 582 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 APBA1Q02410 837 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ILKQ13418 452 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 RAPGEF1Q13905 1077 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 DRAP1Q14919 205 aaPredicted RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SHBQ15464 509 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ARHGAP44Q17R89 818 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ZNF394Q53GI3 561 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 GJB7Q6PEY0 223 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SCD5Q86SK9 330 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 TADA2BQ86TJ2 420 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 FAM71AQ8IYT1 594 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 CPXM2Q8N436 756 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SNRNP27Q8WVK2 155 aaKnown RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 HEXIM2Q96MH2 286 aaKnown RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SPAG5Q96R06 1193 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 ELF4Q99607 663 aaPredicted RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 MED10Q9BTT4 135 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 DCLK3Q9C098 648 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 XPO4Q9C0E2 1151 aaKnown RBP8.04□□□□□ -1.12
ABCD4-220ENST00000553998 BTBD1Q9H0C5 482 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 LHX5Q9H2C1 402 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SGK2Q9HBY8 427 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 KRT82Q9NSB4 513 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 CLEC4EQ9ULY5 219 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 SSUH2Q9Y2M2 353 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.04□□□□□ -1.124e-7■□□□□ 11.3
ABCD4-220ENST00000553998 FHOD1Q9Y613 1164 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 HECTD1Q9ULT8 2610 aa8.04□□□□□ -1.12
ABCD4-220ENST00000553998 KNTC1P50748 2209 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 A0A1W2PPC4 97 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 A0A1W2PQH9 124 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 A0A1W2PQJ5 194 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 F8VZ95 297 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 O00370 1275 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 FOXN3O00409 490 aaPredicted RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 MDM4O15151 490 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 EPHB6O15197 1021 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 YKT6O15498 198 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 LDOC1O95751 146 aaPredicted RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CCDC172P0C7W6 258 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 KRT5P13647 590 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CD19P15391 556 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 SOX5P35711 763 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 KLK7P49862 253 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 BCAT1P54687 386 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 JAM2P57087 298 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 SLC8A3P57103 927 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 RPS14P62263 151 aaKnown RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 RHDQ02161 417 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 PTK2Q05397 1052 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 TRIM14Q14142 442 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CNGA2Q16280 664 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 SGO2Q562F6 1265 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 LCLAT1Q6UWP7 414 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 SERPINA13PQ6UXR4 307 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CLEC20AQ6ZU45 233 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 GPRIN1Q7Z2K8 1008 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CCDC186Q7Z3E2 898 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 FAM124AQ86V42 546 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 ERICH1Q86X53 443 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 C12orf29Q8N999 325 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 SLC2A14Q8TDB8 520 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 BHMTQ93088 406 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CYFIP2Q96F07 1278 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CNDP2Q96KP4 475 aaKnown RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 CDK5RAP1Q96SZ6 601 aaKnown RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 UBXN6Q9BZV1 441 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 TRIM5Q9C035 493 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 TTYH3Q9C0H2 523 aa8.03□□□□□ -1.12
ABCD4-220ENST00000553998 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
ABCD4-220ENST00000553998 PRSS16Q9NQE7 514 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms