RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 HMGCS2P54868 508 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ALDH18A1P54886 795 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 HDAC4P56524 1084 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ABCE1P61221 599 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SH3BP2P78314 561 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SP4Q02446 784 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 KDSRQ06136 332 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 USP4Q13107 963 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 LSAMPQ13449 338 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 BMPR2Q13873 1038 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CCNIQ14094 377 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 PDE1CQ14123 709 aaPredicted RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 RFTN1Q14699 578 aaPredicted RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 PCBP1Q15365 356 aaKnown RBP eCLIP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ADRM1Q16186 407 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SEZ6Q53EL9 994 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF484Q5JVG2 852 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CELF3Q5SZQ8 465 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 N4BP2L1Q5TBK1 243 aaPredicted RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 GRTP1Q5TC63 336 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 THEMIS2Q5TEJ8 643 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 EEF1DP3Q658K8 133 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 NCBP2-AS2Q69YL0 99 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 HEATR6Q6AI08 1181 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SCARA3Q6AZY7 606 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 JADE1Q6IE81 842 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 OR6B2Q6IFH4 312 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TRMT10BQ6PF06 316 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TRMT1LQ7Z2T5 733 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 MAVSQ7Z434 540 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 BNIPLQ7Z465 357 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CLEC14AQ86T13 490 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 KBTBD6Q86V97 674 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TICAM1Q8IUC6 712 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 KLHDC8BQ8IXV7 354 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 AHI1Q8N157 1196 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SIX5Q8N196 739 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 FBXW8Q8N3Y1 598 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CPSF7Q8N684 471 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 FBXO27Q8NI29 283 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 PPP1R14CQ8TAE6 165 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 DTX3LQ8TDB6 740 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC35F5Q8WV83 523 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TFB1MQ8WVM0 346 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 HTR3CQ8WXA8 447 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ARNTL2Q8WYA1 636 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 LZICQ8WZA0 190 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TOP1MTQ969P6 601 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ZBTB10Q96DT7 871 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 HPDLQ96IR7 371 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 MAML3Q96JK9 1138 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 HSFY1Q96LI6 401 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 RILPQ96NA2 401 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CSPG4P5Q96PW8 444 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TUBGCP5Q96RT8 1024 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 WRNIP1Q96S55 665 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC9A7Q96T83 725 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 GORASP1Q9BQQ3 440 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 MCMBPQ9BTE3 642 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 C20orf27Q9GZN8 174 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 BRD8Q9H0E9 1235 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SMARCAD1Q9H4L7 1026 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF385DQ9H6B1 395 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 SUDS3Q9H7L9 328 aaPredicted RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF696Q9H7X3 374 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 C10orf88Q9H8K7 445 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ALG13Q9NP73 1137 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 MRPL40Q9NQ50 206 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 XPNPEP3Q9NQH7 507 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 NSMCE4AQ9NXX6 385 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 NXF1Q9UBU9 619 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 STK39Q9UEW8 545 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 TSPAN16Q9UKR8 245 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 CNOT11Q9UKZ1 510 aaKnown RBP5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 RAB26Q9ULW5 256 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 PSMD13Q9UNM6 376 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 POMPQ9Y244 141 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ANKRD6Q9Y2G4 727 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 DNAJC16Q9Y2G8 782 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 ZNF236Q9UL36 1845 aa5.39□□□□□ -1.55
TMEM55B-204ENST00000553602 DNAJC25-GNG10A0A024R161 153 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 CCDC195A0A1B0GUA6 201 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 DYTNA2CJ06 578 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 C2orf71A6NGG8 1288 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 LACTBL1A8MY62 500 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 H3BNX3 289 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 INO80B-WBP1J3KQ70 363 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 CYB561D2O14569 222 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 TPP1O14773 563 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 NCAM2O15394 837 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 PAPSS1O43252 624 aaPredicted RBP5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 TIMM44O43615 452 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 RNASEH1O60930 286 aaKnown RBP5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 AVILO75366 819 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 TADA2AO75478 443 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 DAB1O75553 588 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 PIAS1O75925 651 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 USP1O94782 785 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 METTL18O95568 372 aa5.38□□□□□ -1.55
TMEM55B-204ENST00000553602 SLC25A27O95847 323 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms