RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 PARVAQ9NVD7 372 aa8.54□□□□□ -1.04
PCNX1-204ENST00000553428 IFNKQ9P0W0 207 aa8.54□□□□□ -1.04
PCNX1-204ENST00000553428 CALCOCO1Q9P1Z2 691 aa8.54□□□□□ -1.04
PCNX1-204ENST00000553428 PPARGC1AQ9UBK2 798 aaKnown RBP8.54□□□□□ -1.04
PCNX1-204ENST00000553428 INTS6Q9UL03 887 aaKnown RBP8.54□□□□□ -1.04
PCNX1-204ENST00000553428 VANGL2Q9ULK5 521 aa8.54□□□□□ -1.04
PCNX1-204ENST00000553428 TBC1D30Q9Y2I9 924 aa8.54□□□□□ -1.04
PCNX1-204ENST00000553428 LUC7L2Q9Y383 392 aaKnown RBP8.54□□□□□ -1.04
PCNX1-204ENST00000553428 MYOFQ9NZM1 2061 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 GPR179Q6PRD1 2367 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 CXorf51AA0A1B0GTR3 108 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 BCLAF3A2AJT9 711 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 TARSL2A2RTX5 802 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 MAP3K13O43283 966 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 IGLV3-19P01714 112 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SERPING1P05155 500 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ZNF806P0C7X5 589 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 TGM1P22735 817 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 OXTRP30559 389 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 RFC1P35251 1148 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ADRA1BP35368 520 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 HOXD12P35452 270 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ZNF143P52747 638 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ATP11AP98196 1134 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ECT2LQ008S8 904 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SCAPQ12770 1279 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 HNRNPA1L2Q32P51 320 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 FSCBQ5H9T9 825 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PPP1R15BQ5SWA1 713 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 C6orf118Q5T5N4 469 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 RNF219Q5W0B1 726 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PLEKHA7Q6IQ23 1121 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 CXorf57Q6NSI4 855 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 DCUN1D2Q6PH85 259 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 WDR59Q6PJI9 974 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ZNF571Q7Z3V5 609 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 FAM131BQ86XD5 332 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 TMPRSS6Q8IU80 811 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 DRC7Q8IY82 874 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ZNF683Q8IZ20 524 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 DCLK2Q8N568 766 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 EMC1Q8N766 993 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 JOSD2Q8TAC2 188 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 FNIP1Q8TF40 1166 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 CYB5D2Q8WUJ1 264 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PRCCQ92733 491 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 NTAN1Q96AB6 310 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SIPA1Q96FS4 1042 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 NCAPGQ9BPX3 1015 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 CNPY3Q9BT09 278 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 XPO4Q9C0E2 1151 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 OSBPL2Q9H1P3 480 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PRDM16Q9HAZ2 1276 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PRSS16Q9NQE7 514 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ITM2CQ9NQX7 267 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 VPS45Q9NRW7 570 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SEMA4GQ9NTN9 838 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 USP36Q9P275 1121 aaKnown RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 USP18Q9UMW8 372 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SCML1Q9UN30 329 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 ERVW-1Q9UQF0 538 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 RAD54BQ9Y620 910 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 SCINQ9Y6U3 715 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 PTPRZ1P23471 2315 aaPredicted RBP8.53□□□□□ -1.04
PCNX1-204ENST00000553428 FAM186AA6NE01 2351 aa8.53□□□□□ -1.04
PCNX1-204ENST00000553428 OTOGLQ3ZCN5 2332 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 RIF1Q5UIP0 2472 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 EDDM13A0A1B0GTR0 161 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 EIF3CLB5ME19 914 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 E9PAM4 449 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 I6L893 689 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 DDX3XO00571 662 aaKnown RBP eCLIP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 DCLK1O15075 740 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 RNASEH1O60930 286 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 RTN2O75298 545 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 FTLP02792 175 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 TPM1P09493 284 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 ACADMP11310 421 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 BCKDHBP21953 392 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 RRM1P23921 792 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 CD6P30203 668 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 HNRNPH3P31942 346 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 ETFBP38117 255 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 MPLP40238 635 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 COPAP53621 1224 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 ATXN1P54253 815 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 KRT83P78385 493 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 SPEM2Q0P670 501 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 MAMLD1Q13495 774 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 CDO1Q16878 200 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 C15orf59Q2T9L4 293 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 TTC31Q49AM3 519 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 TDRD12Q587J7 1177 aaKnown RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 PLA2G2CQ5R387 149 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 E4F1Q66K89 784 aaPredicted RBP8.52□□□□□ -1.05
PCNX1-204ENST00000553428 HGSNATQ68CP4 663 aa8.52□□□□□ -1.05
PCNX1-204ENST00000553428 ZNF776Q68DI1 518 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms