RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CCP110O43303 1012 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 PI15O43692 258 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 FOXD2O60548 495 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF217O75362 1048 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 MTA2O94776 668 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 LCA5LO95447 670 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 FECHP22830 423 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 KIR2DL1P43626 348 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 CLCN6P51797 869 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 HADHBP55084 474 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 HDAC4P56524 1084 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 RPS24P62847 133 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 ECT2LQ008S8 904 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 CSTF1Q05048 431 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 ZBTB16Q05516 673 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 GFPT1Q06210 699 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 FZD5Q13467 585 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 CRY1Q16526 586 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 USP39Q53GS9 565 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 C2orf27AQ580R0 203 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 NADSYN1Q6IA69 706 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 RFWD3Q6PCD5 774 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 POLNQ7Z5Q5 900 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 LONP2Q86WA8 852 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 VSIG1Q86XK7 387 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 CCAR2Q8N163 923 aaKnown RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 PHTF2Q8N3S3 785 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 JOSD2Q8TAC2 188 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 BHMTQ93088 406 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 WBP2Q969T9 261 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 TTC17Q96AE7 1141 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 SPACA7Q96KW9 195 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 GABRG3Q99928 467 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 TSGA10Q9BZW7 698 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 MUC3BQ9H195 1237 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 ABCB8Q9NUT2 735 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 THAP10Q9P2Z0 257 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 USP18Q9UMW8 372 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 SCML1Q9UN30 329 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 MTF2Q9Y483 593 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 EPN1Q9Y6I3 576 aaPredicted RBP10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 COL4A2P08572 1712 aa10.57□□□□□ -0.72
TRAFD1-208ENST00000552890 TARSL2A2RTX5 802 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SHISA7A6NL88 538 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 H3BRJ5 948 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SCAMP3O14828 347 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SRGAP2O75044 1071 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF189O75820 626 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 NDUFA10O95299 355 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 KLF8O95600 359 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 RHOCP08134 193 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 EPHB2P29323 1055 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 HLA-FP30511 346 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SLC6A4P31645 630 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SERPINB6P35237 376 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 TIE1P35590 1138 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 CETN2P41208 172 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SLC6A11P48066 632 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 VCPP55072 806 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 PDK2Q15119 407 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 C15orf59Q2T9L4 293 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 PARP15Q460N3 678 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 FNDC3BQ53EP0 1204 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 LRRC38Q5VT99 294 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 MBLAC2Q68D91 279 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 RWDD4Q6NW29 188 aaKnown RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 SERPINA13PQ6UXR4 307 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 IL17RCQ8NAC3 791 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 ATOH1Q92858 354 aaPredicted RBP10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 VPS28Q9UK41 221 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 FZD10Q9ULW2 581 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 AP4E1Q9UPM8 1137 aa10.56□□□□□ -0.72
TRAFD1-208ENST00000552890 EDDM13A0A1B0GTR0 161 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 GOLGA6L7A0A1B0GV03 622 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 BTNL10A8MVZ5 291 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 WASH4PA8MWX3 477 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF487B1APH4 448 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 ARHGAP6O43182 974 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 RAMP2O60895 175 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 PROSCO94903 275 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 HOXB2P14652 356 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 COL9A1P20849 921 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 MIPP30301 263 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 OXTRP30559 389 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 SSR1P43307 286 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 RECQLP46063 649 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 NOP2P46087 812 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 TPI1P60174 286 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 PITX1P78337 314 aaPredicted RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 KIF5AQ12840 1032 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 ENPP2Q13822 863 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 IER5LQ5T953 404 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 SLC36A4Q6YBV0 504 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 BZW1Q7L1Q6 419 aaKnown RBP10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 KIAA1328Q86T90 577 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 WDR5BQ86VZ2 330 aa10.55□□□□□ -0.72
TRAFD1-208ENST00000552890 C12orf40Q86WS4 652 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms