RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 KIR2DL1P43626 348 aaPredicted RBP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 OXCT1P55809 520 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 MRPS21P82921 87 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 MTAPQ13126 283 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 TCEAL1Q15170 157 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 HADHQ16836 314 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 BOLA3Q53S33 107 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 PKN3Q6P5Z2 889 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 KIAA1328Q86T90 577 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 TBC1D31Q96DN5 1066 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 CIPCQ9C0C6 399 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 ZWILCHQ9H900 591 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 ELOVL2Q9NXB9 296 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 PPARGC1AQ9UBK2 798 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 REXO2Q9Y3B8 237 aaKnown RBP16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 STARD13Q9Y3M8 1113 aa16.71■□□□□ 0.27
CHMP1A-209ENST00000550872 CHURC1-FNTBB4DL54 471 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 MOCS3O95396 460 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 KLF8O95600 359 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 TCF4P15884 667 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 POLR2EP19388 210 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 IL1R2P27930 398 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 ARHGAP25P42331 645 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 VAV2P52735 878 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 EIF4HQ15056 248 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 CA9Q16790 459 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 MANEALQ5VSG8 457 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 EGFLAMQ63HQ2 1017 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 TMEM215Q68D42 235 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 MBLAC2Q68D91 279 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 CYP4V2Q6ZWL3 525 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 TFAP2DQ7Z6R9 452 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 KIAA0907Q7Z7F0 614 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 CPNE8Q86YQ8 564 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 PSTKQ8IV42 348 aaKnown RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 AHI1Q8N157 1196 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 CCDC33Q8N5R6 958 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 ALLCQ8N6M5 410 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 ZNF513Q8N8E2 541 aaPredicted RBP16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 KCNV2Q8TDN2 545 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 ACDQ96AP0 544 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 LMLNQ96KR4 655 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 EPAS1Q99814 870 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 DESI2Q9BSY9 194 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 ZDHHC4Q9NPG8 344 aa16.7■□□□□ 0.26
CHMP1A-209ENST00000550872 A0A0A6YYK5 440 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 RCCD1A6NED2 376 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 ARHGAP6O43182 974 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 LAMTOR5O43504 91 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 NRDCO43847 1150 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 RHOCP08134 193 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 RARAP10276 462 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 RHOQP17081 205 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 EPHB2P29323 1055 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 OR1E1P30953 314 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 MAN1A1P33908 653 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 CSKP41240 450 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 CXCL12P48061 93 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 NUBP1P53384 320 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 SEMA3BQ13214 749 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 SLC12A1Q13621 1099 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 DMC1Q14565 340 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 SMTNL2Q2TAL5 461 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 FUT11Q495W5 492 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 KCNT1Q5JUK3 1230 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 ARTNQ5T4W7 220 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 TXNRD3NBQ6F5E7 133 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 CXorf57Q6NSI4 855 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 ADIPOR2Q86V24 386 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 C1orf210Q8IVY1 113 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 APCDD1Q8J025 514 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 TXLNBQ8N3L3 684 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 IL17RCQ8NAC3 791 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 SORCS1Q8WY21 1168 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 HSPH1Q92598 858 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 INTS6Q9UL03 887 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 HCN2Q9UL51 889 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 DOCK4Q8N1I0 1966 aa16.69■□□□□ 0.26
CHMP1A-209ENST00000550872 KMT2EQ8IZD2 1858 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 EEF2KO00418 725 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 ATP5BP06576 529 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 HNRNPLP14866 589 aaKnown RBP eCLIP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 MZF1P28698 734 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 GJC1P36383 396 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 WASP42768 502 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 CCR3P51677 355 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 PTPN5P54829 565 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 HADHBP55084 474 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 NAP1L1P55209 391 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 TPI1P60174 286 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 SLC25A11Q02978 314 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 E2F5Q15329 346 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 PLEKHG6Q3KR16 790 aa16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 HSF5Q4G112 596 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-209ENST00000550872 PPP6R3Q5H9R7 873 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms