RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 ARHGEF19Q8IW93 802 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 SLC39A13Q96H72 371 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 BBC3Q96PG8 261 aaPredicted RBP15.96■□□□□ 0.15
RAB5C-205ENST00000550013 DDX50Q9BQ39 737 aaKnown RBP15.96■□□□□ 0.15
RAB5C-205ENST00000550013 SCUBE2Q9NQ36 999 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 SLCO3A1Q9UIG8 710 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 TLR6Q9Y2C9 796 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.15
RAB5C-205ENST00000550013 DOCK9Q9BZ29 2069 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 TYW5A2RUC4 315 aaKnown RBP15.95■□□□□ 0.14
RAB5C-205ENST00000550013 LRRC72A6NJI9 287 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 DFNA5O60443 496 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 LUC7L3O95232 432 aaKnown RBP15.95■□□□□ 0.14
RAB5C-205ENST00000550013 SLC8A1P32418 973 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ARID5BQ14865 1188 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 STILQ15468 1287 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 SYPL2Q5VXT5 272 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 RRAGAQ7L523 313 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 SCUBE3Q8IX30 993 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 APCDD1Q8J025 514 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 LGI2Q8N0V4 545 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 STK40Q8N2I9 435 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 AADATQ8N5Z0 425 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ENGASEQ8NFI3 743 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 OR2T34Q8NGX1 318 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 LMO3Q8TAP4 145 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 SPATA20Q8TB22 786 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 FAM149B1Q96BN6 582 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 CRELD1Q96HD1 420 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 SERPINB11Q96P15 392 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 FAM129BQ96TA1 746 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ELF4Q99607 663 aaPredicted RBP15.95■□□□□ 0.14
RAB5C-205ENST00000550013 OMDQ99983 421 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ST7Q9NRC1 585 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 AASDHPPTQ9NRN7 309 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ADAMTS1Q9UHI8 967 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 MYLKQ15746 1914 aa15.95■□□□□ 0.14
RAB5C-205ENST00000550013 ITIH6Q6UXX5 1313 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 ARID1BQ8NFD5 2236 aaPredicted RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 EDDM13A0A1B0GTR0 161 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 A0A1W2PR77 199 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 C10orf142B7Z368 130 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 PMM2O15305 246 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 SMC2O95347 1197 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 SRPRAP08240 638 aaKnown RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 STK19P49842 368 aaPredicted RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 ECT2LQ008S8 904 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 DNAJC3Q13217 504 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 NNTQ13423 1086 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 CCDC40Q4G0X9 1142 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 RAP1GAP2Q684P5 730 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 ISM2Q6H9L7 571 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 CCDC117Q8IWD4 279 aaPredicted RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 PDCD7Q8N8D1 485 aaKnown RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 KDM1BQ8NB78 822 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 RPL10LQ96L21 214 aaKnown RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 METTL14Q9HCE5 456 aaKnown RBP15.94■□□□□ 0.14
RAB5C-205ENST00000550013 FZD4Q9ULV1 537 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 CEP83Q9Y592 693 aa15.94■□□□□ 0.14
RAB5C-205ENST00000550013 PLK4O00444 970 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 ENC1O14682 589 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 LDOC1O95751 146 aaPredicted RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 VAV1P15498 845 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CD44P16070 742 aaKnown RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 ABCB4P21439 1286 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CD38P28907 300 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 GPD2P43304 727 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 RPL34P49207 117 aaKnown RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CCR5P51681 352 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 ADPRHP54922 357 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 PPP2CBP62714 309 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 PPP2CAP67775 309 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 SFSWAPQ12872 951 aaKnown RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 ZC3H12AQ5D1E8 599 aaKnown RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 DENND1BQ6P3S1 775 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CHSY1Q86X52 802 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 EID2Q8N6I1 236 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 OR14C36Q8NHC7 312 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 SAP25Q8TEE9 199 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CNDP2Q96KP4 475 aaKnown RBP15.93■□□□□ 0.14
RAB5C-205ENST00000550013 CEP63Q96MT8 703 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 KREMEN1Q96MU8 473 aa15.93■□□□□ 0.14
RAB5C-205ENST00000550013 PSMA7O14818 248 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 MOCS3O95396 460 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 APOEP02649 317 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 ITGAVP06756 1048 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 GOT1P17174 413 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 TACR2P21452 398 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 MZF1P28698 734 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-205ENST00000550013 METAP1P53582 386 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 PITX1P78337 314 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-205ENST00000550013 RNF219Q5W0B1 726 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-205ENST00000550013 SND1Q7KZF4 910 aaKnown RBP eCLIP15.92■□□□□ 0.14
RAB5C-205ENST00000550013 TMPRSS12Q86WS5 348 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 CIR1Q86X95 450 aaPredicted RBP15.92■□□□□ 0.14
RAB5C-205ENST00000550013 PTPRN2Q92932 1015 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 SKA1Q96BD8 255 aa15.92■□□□□ 0.14
RAB5C-205ENST00000550013 SERAC1Q96JX3 654 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms