RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 ASTLQ6HA08 431 aaPredicted RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 CXorf57Q6NSI4 855 aaKnown RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 TPRG1Q6ZUI0 275 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 MAP7D3Q8IWC1 876 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 CARNMT1Q8N4J0 409 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 RTL3Q8N8U3 475 aaKnown RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 EDAQ92838 391 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 FAF2Q96CS3 445 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 TRIM44Q96DX7 344 aaPredicted RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 P2RY13Q9BPV8 354 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 DEC1Q9P2X7 70 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 FBXL21Q9UKT6 434 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 PACSIN2Q9UNF0 486 aaPredicted RBP21.7■■□□□ 1.06
CACNB3-210ENST00000548874 SLC27A6Q9Y2P4 619 aa21.7■■□□□ 1.06
CACNB3-210ENST00000548874 LRRD1A4D1F6 860 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 TRIM24O15164 1050 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 DDX3YO15523 660 aaKnown RBP21.69■■□□□ 1.06
CACNB3-210ENST00000548874 HLA-FP30511 346 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 MAPKAPK2P49137 400 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 DGKGP49619 791 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 STARD6P59095 220 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 SIGLEC14Q08ET2 396 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 MESP2Q0VG99 397 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 MMRN1Q13201 1228 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 CDH18Q13634 790 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 FSCBQ5H9T9 825 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 ZFYVE27Q5T4F4 411 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 MEI1Q5TIA1 1274 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 GRAMD4Q6IC98 578 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 TFAP2DQ7Z6R9 452 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 KIAA0907Q7Z7F0 614 aaPredicted RBP21.69■■□□□ 1.06
CACNB3-210ENST00000548874 SUGP1Q8IWZ8 645 aaKnown RBP21.69■■□□□ 1.06
CACNB3-210ENST00000548874 EXD1Q8NHP7 514 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 ALG3Q92685 438 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 PNKPQ96T60 521 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 CATSPERBQ9H7T0 1116 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 ARHGEF4Q9NR80 690 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 ZKSCAN5Q9Y2L8 839 aa21.69■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.68■■□□□ 1.06
CACNB3-210ENST00000548874 PI4K2BG5E9Z4 385 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 H0Y626 953 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 MAN2B1O00754 1011 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 KIF5CO60282 957 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 ERCC2P18074 760 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 GALK1P51570 392 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF177Q13360 481 aaPredicted RBP21.68■■□□□ 1.06
CACNB3-210ENST00000548874 TAZQ16635 292 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 TMEM196Q5HYL7 178 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 SETD3Q86TU7 594 aaPredicted RBP21.68■■□□□ 1.06
CACNB3-210ENST00000548874 SIX5Q8N196 739 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 C17orf53Q8N3J3 647 aaPredicted RBP21.68■■□□□ 1.06
CACNB3-210ENST00000548874 OR52K2Q8NGK3 314 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 FAM3CQ92520 227 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 SHDQ96IW2 340 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 CALN1Q9BXU9 219 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 FBRSL1Q9HCM7 1045 aaKnown RBP21.68■■□□□ 1.06
CACNB3-210ENST00000548874 NDFIP2Q9NV92 336 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 F5P12259 2224 aa21.68■■□□□ 1.06
CACNB3-210ENST00000548874 TTC28Q96AY4 2481 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 A0A0A0MRY4 1105 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 DCLK1O15075 740 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 ZRANB2O95218 330 aaKnown RBP eCLIP21.67■■□□□ 1.06
CACNB3-210ENST00000548874 CD70P32970 193 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 RWDD2BP57060 319 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 LMAN2Q12907 356 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 PON2Q15165 354 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 ANKRD20A8PQ5CZ79 823 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF569Q5MCW4 686 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 C6orf118Q5T5N4 469 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 MFSD7Q6UXD7 560 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 ANKS1BQ7Z6G8 1248 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 CCDC117Q8IWD4 279 aaPredicted RBP21.67■■□□□ 1.06
CACNB3-210ENST00000548874 RCOR2Q8IZ40 523 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 UBL4BQ8N7F7 174 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 TERB1Q8NA31 727 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 PCDH19Q8TAB3 1148 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 EXOC4Q96A65 974 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 RNF25Q96BH1 459 aaPredicted RBP21.67■■□□□ 1.06
CACNB3-210ENST00000548874 RBM41Q96IZ5 413 aaKnown RBP21.67■■□□□ 1.06
CACNB3-210ENST00000548874 ABCB8Q9NUT2 735 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 KIAA1522Q9P206 1035 aaPredicted RBP21.67■■□□□ 1.06
CACNB3-210ENST00000548874 GGA2Q9UJY4 613 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 MIA3Q5JRA6 1907 aa21.67■■□□□ 1.06
CACNB3-210ENST00000548874 DAPK3O43293 454 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 KAT7O95251 611 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 PABPC1P11940 636 aaKnown RBP21.66■■□□□ 1.06
CACNB3-210ENST00000548874 ALADP13716 330 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 AMPD1P23109 780 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 OR1E1P30953 314 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 GRIA2P42262 883 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 CDKN2BP42772 138 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 OXCT1P55809 520 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 KDSRQ06136 332 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 PREPLQ4J6C6 727 aaPredicted RBP21.66■■□□□ 1.06
CACNB3-210ENST00000548874 FSTL4Q6MZW2 842 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF852Q6ZMS4 543 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 ZNF783Q6ZMS7 281 aa21.66■■□□□ 1.06
CACNB3-210ENST00000548874 SPOCD1Q6ZMY3 1216 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms