RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 HNRNPA1L2Q32P51 320 aaKnown RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 PLEKHG6Q3KR16 790 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 PITRM1Q5JRX3 1037 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 BRMS1LQ5PSV4 323 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 ZNF776Q68DI1 518 aaPredicted RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 ARCQ7LC44 396 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 SLC39A7Q92504 469 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 RPRD1AQ96P16 312 aaPredicted RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 PRMT1Q99873 361 aaKnown RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 NAT10Q9H0A0 1025 aaKnown RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 BTBD1Q9H0C5 482 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 RSPH9Q9H1X1 276 aaPredicted RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 VPS16Q9H269 839 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 SLC32A1Q9H598 525 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 WDCPQ9H6R7 721 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 FANCLQ9NW38 375 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 COX16Q9P0S2 106 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 XPO7Q9UIA9 1087 aaKnown RBP11.76□□□□□ -0.53
BEST3-209ENST00000548658 ERVW-1Q9UQF0 538 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 NCKAP1Q9Y2A7 1128 aa11.76□□□□□ -0.53
BEST3-209ENST00000548658 TNRC6BQ9UPQ9 1833 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 LRRC10BA6NIK2 292 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 UPK3BL1B0FP48 263 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 UPK3BL2E5RIL1 263 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 OPHN1O60890 802 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 CLDN11O75508 207 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 PNMA6AP0CW24 399 aaPredicted RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 CDK11BP21127 795 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 MAPK8P45983 427 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 NOVA1P51513 510 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 RNASE9P60153 205 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 RPS14P62263 151 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 PITX1P78337 314 aaPredicted RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 MYL5Q02045 173 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 SLC14A1Q13336 389 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 ZNF177Q13360 481 aaPredicted RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 AUHQ13825 339 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 UAP1L1Q3KQV9 507 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 SLC25A52Q3SY17 297 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 FSCBQ5H9T9 825 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 FBXL22Q6P050 247 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 USP30Q70CQ3 517 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 CCAR2Q8N163 923 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 EPS8L1Q8TE68 723 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 NT5C3BQ969T7 300 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 PGAP3Q96FM1 320 aaPredicted RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 SPAG5Q96R06 1193 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 NPY6RQ99463 290 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 GTPBP2Q9BX10 602 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 SGK2Q9HBY8 427 aa11.75□□□□□ -0.53
BEST3-209ENST00000548658 INTS6Q9UL03 887 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 ATXN2Q99700 1313 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 CNOT1A5YKK6 2376 aaKnown RBP11.75□□□□□ -0.53
BEST3-209ENST00000548658 LAMA1P25391 3075 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 EDDM13A0A1B0GTR0 161 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 BCAT2O15382 392 aaPredicted RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 PAGE1O75459 146 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 SOX5P35711 763 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 STAT1P42224 750 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 CXCR3P49682 368 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 POLR2FP61218 127 aaKnown RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 HNRNPDQ14103 355 aaKnown RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 C5orf22Q49AR2 442 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 FAM102AQ5T9C2 384 aaPredicted RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 N4BP2L1Q5TBK1 243 aaPredicted RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 SH3PXD2AQ5TCZ1 1133 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 TAF3Q5VWG9 929 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 PSAPL1Q6NUJ1 521 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 IL27RAQ6UWB1 636 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 TRIM72Q6ZMU5 477 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 NOP9Q86U38 636 aaKnown RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 FAM124AQ86V42 546 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 CACUL1Q86Y37 369 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 ZNF366Q8N895 744 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 MYEOVQ96EZ4 313 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 MYO19Q96H55 970 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 MRGPRX3Q96LB0 322 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 C1orf74Q96LT6 269 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 PCMTD1Q96MG8 357 aaPredicted RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 CD93Q9NPY3 652 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 FAM207AQ9NSI2 230 aaPredicted RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 DNAAF2Q9NVR5 837 aaKnown RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 ARHGEF38Q9NXL2 777 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 TPX2Q9ULW0 747 aaKnown RBP11.74□□□□□ -0.53
BEST3-209ENST00000548658 ITIH6Q6UXX5 1313 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 SPTBN2O15020 2390 aa11.74□□□□□ -0.53
BEST3-209ENST00000548658 SIN3BO75182 1162 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 GFPT2O94808 682 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 SEMA4FO95754 770 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 MMEP08473 750 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 PDGFRAP16234 1089 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 MAOBP27338 520 aa11.73□□□□□ -0.53
BEST3-209ENST00000548658 ACSL1P33121 698 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms