RNA–Protein interactions for RNA: ENST00000547765.5

TUBA1B-204, Transcript of tubulin alpha 1b, humanhuman

TSL 5

Gene TUBA1B, Length 1,875 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-204ENST00000547765 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.6□□□□□ -0.232e-6■■■■■ 41.7
TUBA1B-204ENST00000547765 UCMAQ8WVF2 138 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 STON2Q8WXE9 905 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 WNT8BQ93098 351 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 OPTNQ96CV9 577 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SLC2A13Q96QE2 648 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 LPIN3Q9BQK8 851 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 YIPF3Q9GZM5 350 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SNX15Q9NRS6 342 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SPATS2LQ9NUQ6 558 aaKnown RBP13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 TMEM216Q9P0N5 145 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SEPT10Q9P0V9 454 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 TRHDEQ9UKU6 1024 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 MCM3APO60318 1980 aa13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
TUBA1B-204ENST00000547765 SMIM28A0A1B0GU29 152 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ZNF195O14628 629 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DCLK1O15075 740 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 TIMM44O43615 452 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 GPR32O75388 356 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 BAG2O95816 211 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 TOP3BO95985 862 aaKnown RBP13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 MMP3P08254 477 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DARSP14868 501 aaKnown RBP13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DNAJB1P25685 340 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DNAJB2P25686 324 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 LMO2P25791 158 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 PSEN1P49768 467 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CACNA2D1P54289 1103 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ADIGQ0VDE8 80 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SNAPC2Q13487 334 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 HNRNPDQ14103 355 aaKnown RBP13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DUSP28Q4G0W2 176 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 PDPK2PQ6A1A2 396 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ITPRIPL1Q6GPH6 555 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 TMEM135Q86UB9 458 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CLPTM1LQ96KA5 538 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CXCL16Q9H2A7 254 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 LRRC4Q9HBW1 653 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CASS4Q9NQ75 786 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 PNPOQ9NVS9 261 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ZDHHC7Q9NXF8 308 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 NSMCE4AQ9NXX6 385 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 IL1RAPL1Q9NZN1 696 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 KLHL8Q9P2G9 620 aaPredicted RBP13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SMIM35A0A1B0GVV1 85 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 M0QYT0 321 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 PSMD3O43242 534 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SMIM24O75264 130 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ERVK-10P10266 1014 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ACAT1P24752 427 aaKnown RBP13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SCAPQ12770 1279 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CFAP157Q5JU67 520 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 BSPRYQ5W0U4 402 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 MAVSQ7Z434 540 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 LCA5Q86VQ0 697 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 KBTBD2Q8IY47 623 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SIX6OS1Q8N1H7 587 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 DCLK2Q8N568 766 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 RDH11Q8TC12 318 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 VAT1Q99536 393 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 TTC1Q99614 292 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 CDH19Q9H159 772 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 RRN3Q9NYV6 651 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 VANGL2Q9ULK5 521 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ARHGAP26Q9UNA1 814 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 ANKRD6Q9Y2G4 727 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 SCN1AP35498 2009 aa13.59□□□□□ -0.23
TUBA1B-204ENST00000547765 EIF4E1BA6NMX2 242 aaKnown RBP13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 CREB3O43889 395 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 TRIM13O60858 407 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 NPR3P17342 541 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 PTPN3P26045 913 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 ADRA1BP35368 520 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 MLH1P40692 756 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 TUBP50607 506 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 SLC25A3Q00325 362 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 PPIDQ08752 370 aaKnown RBP13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 ITGA9Q13797 1035 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 GLRA4Q5JXX5 417 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 MAP3K21Q5TCX8 1036 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 OTUD1Q5VV17 481 aaPredicted RBP13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 IQSEC1Q6DN90 963 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 EPGNQ6UW88 154 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 IZUMO2Q6UXV1 221 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 STRA8Q7Z7C7 330 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 DHDDSQ86SQ9 333 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 OR6J1Q8NGC5 347 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 ZNF669Q96BR6 464 aaPredicted RBP13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 CDCA5Q96FF9 252 aa13.58□□□□□ -0.24
TUBA1B-204ENST00000547765 IFT43Q96FT9 208 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms