RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 C3orf62Q6ZUJ4 267 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 UBE2Q1Q7Z7E8 422 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 LINC00523Q86TU6 105 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 UMODL1-AS1Q8N2C9 162 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 ATPAF2Q8N5M1 289 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 OR2W6PQ8NHA6 318 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 HERVK_113Q902F9 699 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 C9orf72Q96LT7 481 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 CYTH2Q99418 400 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 LBHD1Q9BQE6 289 aaPredicted RBP13.8□□□□□ -0.2
PTCH1-215ENST00000547672 VN1R3Q9BXE9 311 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 MAGEB5Q9BZ81 275 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 TMPRSS4Q9NRS4 437 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 OSER1Q9NX31 292 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 SEPT10Q9P0V9 454 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
PTCH1-215ENST00000547672 AAR2Q9Y312 384 aaKnown RBP13.8□□□□□ -0.2
PTCH1-215ENST00000547672 HS3ST4Q9Y661 456 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 IKBKGQ9Y6K9 419 aa13.8□□□□□ -0.2
PTCH1-215ENST00000547672 MYO16Q9Y6X6 1858 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 IGLV3-10A0A075B6K4 115 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 EXOC1LA0A1B0GW35 172 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 ZNF840PA6NDX5 716 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 SDR42E2A6NKP2 422 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 SRRM3A6NNA2 597 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-215ENST00000547672 DRGXA6NNA5 263 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 GOLGA8MH3BSY2 632 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 MATN3O15232 486 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
PTCH1-215ENST00000547672 ANXA9O76027 345 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 VNN2O95498 520 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 CXCL14O95715 111 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 MOCS2O96007 188 aaPredicted RBP13.79□□□□□ -0.2
PTCH1-215ENST00000547672 RPL17P18621 184 aaKnown RBP13.79□□□□□ -0.2
PTCH1-215ENST00000547672 ATF6P18850 670 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 MAPKAPK2P49137 400 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 RENBPP51606 427 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 AUHQ13825 339 aaKnown RBP13.79□□□□□ -0.2
PTCH1-215ENST00000547672 RABGAP1LQ5R372 815 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 TMCO4Q5TGY1 634 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 LRRC8BQ6P9F7 803 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 CYS1Q717R9 158 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 MIB1Q86YT6 1006 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 TTC9BQ8N6N2 239 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 GPR152Q8TDT2 470 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 BADQ92934 168 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 TLCD1Q96CP7 247 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 CAPS2Q9BXY5 557 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 LRRC4CQ9HCJ2 640 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 ANLNQ9NQW6 1124 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 LGALS13Q9UHV8 139 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 YIPF1Q9Y548 306 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 ACTL7BQ9Y614 415 aa13.79□□□□□ -0.2
PTCH1-215ENST00000547672 HTTP42858 3142 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 F5H5T6 163 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ADAM12O43184 909 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 LILRB3O75022 631 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 SOAT2O75908 522 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 CPP00450 1065 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 SHBGP04278 402 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 RB1P06400 928 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 CCNB1P14635 433 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 GBP2P32456 591 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ETFBP38117 255 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 NPY2RP49146 381 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 GEMIN4P57678 1058 aaKnown RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 IFI35P80217 286 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 PARP15Q460N3 678 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 GLIPR1L2Q4G1C9 344 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 MS4A13Q5J8X5 152 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 TMEM240Q5SV17 173 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 TTC39BQ5VTQ0 682 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ANKRD22Q5VYY1 191 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 KCTD16Q68DU8 428 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 PDE12Q6L8Q7 609 aaKnown RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 DNAJB7Q7Z6W7 309 aaPredicted RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ZNF567Q8N184 647 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 FBXO36Q8NEA4 188 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 PSMG2Q969U7 264 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 TEKT5Q96M29 485 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ZBP1Q9H171 429 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 CRISPLD1Q9H336 500 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 DNAJC17Q9NVM6 304 aaKnown RBP13.78□□□□□ -0.2
PTCH1-215ENST00000547672 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 ZNF510Q9Y2H8 683 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 IRAK3Q9Y616 596 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 TEX264Q9Y6I9 313 aa13.78□□□□□ -0.2
PTCH1-215ENST00000547672 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 I6L893 689 aaPredicted RBP13.77□□□□□ -0.21
PTCH1-215ENST00000547672 DFFAO00273 331 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 TLL1O43897 1013 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 ACSL4O60488 711 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 MAP3K6O95382 1288 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 SEC24AO95486 1093 aa13.77□□□□□ -0.21
PTCH1-215ENST00000547672 METTL18O95568 372 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms