RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 DLG3Q92796 817 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 PRR11Q96HE9 360 aaPredicted RBP17.52■□□□□ 0.4
LETMD1-210ENST00000547555 RILPQ96NA2 401 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 KLC2Q9H0B6 622 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 APOBEC3GQ9HC16 384 aaKnown RBP17.52■□□□□ 0.4
LETMD1-210ENST00000547555 ARMCX1Q9P291 453 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 CHMP2BQ9UQN3 213 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 TNFSF13BQ9Y275 285 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 TTC3P53804 2025 aa17.52■□□□□ 0.4
LETMD1-210ENST00000547555 FAM159BA6NKW6 160 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 GOLGA8SH3BPF8 625 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 GOLGA8MH3BSY2 632 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 GLRA3O75311 464 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 ITGA2BP08514 1039 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 HARSP12081 509 aaKnown RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 TPSB2P20231 275 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 TGM2P21980 687 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PSMA2P25787 234 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 SERPINB8P50452 374 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 MRPS5P82675 430 aaKnown RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 KDSRQ06136 332 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 TPSAB1Q15661 275 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 HP1BP3Q5SSJ5 553 aaPredicted RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 ATF7IP2Q5U623 682 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 C16orf59Q7L2K0 433 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 SETD3Q86TU7 594 aaPredicted RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 CROCCP3Q8IVE0 287 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PPP4R1Q8TF05 950 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 GDPD5Q8WTR4 605 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 MRRFQ96E11 262 aaKnown RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 CPB2Q96IY4 423 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PDZD7Q9H5P4 517 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PRDM16Q9HAZ2 1276 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 XAB2Q9HCS7 855 aaKnown RBP17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PTPRHQ9HD43 1115 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 DCDC2Q9UHG0 476 aa17.52■□□□□ 0.39
LETMD1-210ENST00000547555 PTPRSQ13332 1948 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 BCLAF3A2AJT9 711 aaKnown RBP17.51■□□□□ 0.39
LETMD1-210ENST00000547555 PRR5-ARHGAP8B1AHC4 643 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 LRCH4O75427 683 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 TOM1L1O75674 476 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 KRT3P12035 628 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 MAGEA3P43357 314 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 MAGEA10P43363 369 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-210ENST00000547555 BASP1P80723 227 aaKnown RBP17.51■□□□□ 0.39
LETMD1-210ENST00000547555 ARHGAP8P85298 464 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 OGDHQ02218 1023 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 NCOA4Q13772 614 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 PDK2Q15119 407 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 FAXCQ5TGI0 409 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 MAP7D3Q8IWC1 876 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 FBXW8Q8N3Y1 598 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 GSDMBQ8TAX9 411 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 RTKNQ9BST9 563 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 RBAKQ9NYW8 714 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-210ENST00000547555 CDH22Q9UJ99 828 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 ARHGAP26Q9UNA1 814 aa17.51■□□□□ 0.39
LETMD1-210ENST00000547555 CEP290O15078 2479 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 A0A0B4J269 797 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ABHD14A-ACY1A0A1B0GW23 586 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 E5RJQ4 531 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 BAIAP3O94812 1187 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 SERPINE1P05121 402 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ACRP10323 421 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 FDFT1P37268 417 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 GDF10P55107 478 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 MTTPP55157 894 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 TUBB3Q13509 450 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 TMEM240Q5SV17 173 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 UBXN11Q5T124 520 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 RARS2Q5T160 578 aaKnown RBP17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ARMC3Q5W041 872 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 EEF1DP3Q658K8 133 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 LLGL2Q6P1M3 1020 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 PSRC1Q6PGN9 363 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-210ENST00000547555 C1orf228Q6PIY5 440 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 RAPH1Q70E73 1250 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 RTN4RL1Q86UN2 441 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ADAM2Q99965 735 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 NIF3L1Q9GZT8 377 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 RGS18Q9NS28 235 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 TBCCD1Q9NVR7 557 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ASNSD1Q9NWL6 643 aa17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ZC3H7BQ9UGR2 993 aaKnown RBP17.5■□□□□ 0.39
LETMD1-210ENST00000547555 ARHGAP42A6NI28 874 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 H3BNX3 289 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 EFCAB14O75071 495 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 H2AFYO75367 372 aaKnown RBP17.49■□□□□ 0.39
LETMD1-210ENST00000547555 CLPTM1O96005 669 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 MLNP12872 115 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 DESP17661 470 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 RANBP1P43487 201 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 MLLT1Q03111 559 aaPredicted RBP17.49■□□□□ 0.39
LETMD1-210ENST00000547555 IKBKEQ14164 716 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 MYBPC3Q14896 1274 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 MPZL3Q6UWV2 235 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 UNC45BQ8IWX7 931 aa17.49■□□□□ 0.39
LETMD1-210ENST00000547555 SPATA18Q8TC71 538 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms