RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 TFAP2DQ7Z6R9 452 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 KIAA0907Q7Z7F0 614 aaPredicted RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 ADIPOR2Q86V24 386 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 MAML2Q8IZL2 1156 aaPredicted RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 PYROXD2Q8N2H3 581 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 ARFGAP1Q8N6T3 406 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 SLC35G2Q8TBE7 412 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 TBC1D31Q96DN5 1066 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 EIF3CQ99613 913 aaKnown RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 EPAS1Q99814 870 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 MAGEB5Q9BZ81 275 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 IRF2BPLQ9H1B7 796 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 PRMT8Q9NR22 394 aaPredicted RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 PPARGC1AQ9UBK2 798 aaKnown RBP17.32■□□□□ 0.36
LTBR-215ENST00000546296 LCMT1Q9UIC8 334 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 MMP17Q9ULZ9 603 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 USP18Q9UMW8 372 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 PCDHA13Q9Y5I0 950 aa17.32■□□□□ 0.36
LTBR-215ENST00000546296 IGLV3-10A0A075B6K4 115 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 TMEM110-MUSTN1A8MSY1 372 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 FAM72CH0Y354 149 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 SGK1O00141 431 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 NPC1O15118 1278 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 CREB3O43889 395 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 LRCH4O75427 683 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 NDUFA10O95299 355 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 LCA5LO95447 670 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 RHOCP08134 193 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 SP9P0CG40 484 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 HNRNPLP14866 589 aaKnown RBP eCLIP17.31■□□□□ 0.36
LTBR-215ENST00000546296 FECHP22830 423 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 OR1E1P30953 314 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 L1CAMP32004 1257 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 CSKP41240 450 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 FUT11Q495W5 492 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 FNDC3BQ53EP0 1204 aaKnown RBP17.31■□□□□ 0.36
LTBR-215ENST00000546296 PITRM1Q5JRX3 1037 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 C6orf118Q5T5N4 469 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 FAM72AQ5TYM5 149 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 RNF219Q5W0B1 726 aaPredicted RBP17.31■□□□□ 0.36
LTBR-215ENST00000546296 FAM72DQ6L9T8 149 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 FAM72BQ86X60 149 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 RHOT2Q8IXI1 618 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 NIPA2Q8N8Q9 360 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 CYB5D2Q8WUJ1 264 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 LMLNQ96KR4 655 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 ACOX2Q99424 681 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 DHX35Q9H5Z1 703 aaKnown RBP17.31■□□□□ 0.36
LTBR-215ENST00000546296 ZWILCHQ9H900 591 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 GPATCH2LQ9NWQ4 482 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 CACNA2D2Q9NY47 1150 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 RAPGEFL1Q9UHV5 662 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 HCN2Q9UL51 889 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 AP4E1Q9UPM8 1137 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 KMT2EQ8IZD2 1858 aa17.31■□□□□ 0.36
LTBR-215ENST00000546296 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 LRIG2O94898 1065 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 DLDP09622 509 aaKnown RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 RHOQP17081 205 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 MZF1P28698 734 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 NOP2P46087 812 aaKnown RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 DGKEP52429 567 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 NRLP54845 237 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 TCF15Q12870 199 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 MESDQ14696 234 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 BOLA3Q53S33 107 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 DAB2IPQ5VWQ8 1189 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 CXorf57Q6NSI4 855 aaKnown RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 SETD3Q86TU7 594 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 APCDD1Q8J025 514 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 TSTD1Q8NFU3 115 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 ATOH1Q92858 354 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 HHIPQ96QV1 700 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 PEBP4Q96S96 227 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 SNRNP25Q9BV90 132 aaKnown RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 POLMQ9NP87 494 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 THAP10Q9P2Z0 257 aaPredicted RBP17.3■□□□□ 0.36
LTBR-215ENST00000546296 TBC1D30Q9Y2I9 924 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 STON1Q9Y6Q2 735 aa17.3■□□□□ 0.36
LTBR-215ENST00000546296 DAPK3O43293 454 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 ADAM23O75077 832 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 PROSCO94903 275 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 PAPSS2O95340 614 aaPredicted RBP17.29■□□□□ 0.36
LTBR-215ENST00000546296 APBB3O95704 486 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 ASLP04424 464 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 CHRM1P11229 460 aaPredicted RBP17.29■□□□□ 0.36
LTBR-215ENST00000546296 HOXB2P14652 356 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 EPHB2P29323 1055 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 NUMBP49757 651 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 ST8SIA6P61647 398 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 ZNF234Q14588 700 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 CRY1Q16526 586 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 HADHQ16836 314 aaKnown RBP17.29■□□□□ 0.36
LTBR-215ENST00000546296 PLEKHG6Q3KR16 790 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 ZNF528Q3MIS6 628 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 MANEALQ5VSG8 457 aa17.29■□□□□ 0.36
LTBR-215ENST00000546296 HEATR6Q6AI08 1181 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms