RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 IGF2-ASQ6U949 168 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 UNC13DQ70J99 1090 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 SND1Q7KZF4 910 aaKnown RBP eCLIP9.75□□□□□ -0.85
CHD4-212ENST00000545083 IQCHQ86VS3 1027 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 MFN1Q8IWA4 741 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 TBC1D3Q8IZP1 549 aaPredicted RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 STK40Q8N2I9 435 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 SPOCK2Q92563 424 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 FAM131CQ96AQ9 280 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 PRR11Q96HE9 360 aaPredicted RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 PRICKLE1Q96MT3 831 aaPredicted RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 USP28Q96RU2 1077 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 C7orf25Q9BPX7 421 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 BACH2Q9BYV9 841 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 OSBPL2Q9H1P3 480 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 BLZF1Q9H2G9 400 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 THSD1Q9NS62 852 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 STIM2Q9P246 746 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 CGNQ9P2M7 1197 aaKnown RBP9.75□□□□□ -0.85
CHD4-212ENST00000545083 CYTH4Q9UIA0 394 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 SLCO3A1Q9UIG8 710 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 SATB2Q9UPW6 733 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 MYO9AB2RTY4 2548 aa9.75□□□□□ -0.85
CHD4-212ENST00000545083 RELNP78509 3460 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 YJEFN3A6XGL0 299 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 E7ENQ6 273 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 EFSO43281 561 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 RTN2O75298 545 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 LATS1O95835 1130 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 ASLP04424 464 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 SLFN14P0C7P3 912 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 VAV1P15498 845 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 TRIM21P19474 475 aaKnown RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 C5AR1P21730 350 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 MZF1P28698 734 aaPredicted RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 SFSWAPQ12872 951 aaKnown RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 SLC39A14Q15043 492 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 RABEP1Q15276 862 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 ISXQ2M1V0 245 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 LINC00303Q3SY05 128 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 POM121L1PQ3SYA9 428 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 FSCBQ5H9T9 825 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 C3orf38Q5JPI3 329 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 C6orf132Q5T0Z8 1188 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 MPP7Q5T2T1 576 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 NADSYN1Q6IA69 706 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 SLC4A11Q8NBS3 891 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 FIBINQ8TAL6 211 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 TAS1R2Q8TE23 839 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 PTPRN2Q92932 1015 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 DHX58Q96C10 678 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 HEXIM2Q96MH2 286 aaKnown RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 SLC46A1Q96NT5 459 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 UBXN6Q9BZV1 441 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 LRRC27Q9C0I9 530 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 NIF3L1Q9GZT8 377 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 CYP3A43Q9HB55 503 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 OLA1Q9NTK5 396 aaKnown RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 ERVW-1Q9UQF0 538 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 HEMK1Q9Y5R4 338 aaPredicted RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 MORC2Q9Y6X9 1032 aaPredicted RBP9.74□□□□□ -0.85
CHD4-212ENST00000545083 DOCK9Q9BZ29 2069 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 ITIH6Q6UXX5 1313 aa9.74□□□□□ -0.85
CHD4-212ENST00000545083 COL27A1Q8IZC6 1860 aaPredicted RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 EDDM13A0A1B0GTR0 161 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TARSL2A2RTX5 802 aaKnown RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 LZTS3O60299 673 aaPredicted RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 ADH1BP00325 375 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 IL1BP01584 269 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TRIM49P0CI25 452 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TRIM49CP0CI26 452 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 ITGB6P18564 788 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 NUMBP49757 651 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 STK19P49842 368 aaPredicted RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 RPS24P62847 133 aaKnown RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 OVGP1Q12889 678 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 CLN3Q13286 438 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 PITRM1Q5JRX3 1037 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 BSPRYQ5W0U4 402 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 CCDC81Q6ZN84 652 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 PRPF39Q86UA1 669 aaKnown RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 SLC9A9Q8IVB4 645 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 KDM1BQ8NB78 822 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TMC2Q8TDI7 906 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 RNF139Q8WU17 664 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TATDN2Q93075 761 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 RPL10LQ96L21 214 aaKnown RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 APOLD1Q96LR9 279 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 MYOCQ99972 504 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 CUEDC2Q9H467 287 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 SARDHQ9UL12 918 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 TPX2Q9ULW0 747 aaKnown RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 DMTF1Q9Y222 760 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 USP9YO00507 2555 aaPredicted RBP9.73□□□□□ -0.85
CHD4-212ENST00000545083 NBASA2RRP1 2371 aa9.73□□□□□ -0.85
CHD4-212ENST00000545083 CDRT15L2A8MXV6 281 aa9.72□□□□□ -0.85
CHD4-212ENST00000545083 IKBKBO14920 756 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms