RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 RFX8Q6ZV50 586 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 MAML2Q8IZL2 1156 aaPredicted RBP9.81□□□□□ -0.84
YBX3-215ENST00000544504 LZTR1Q8N653 840 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 ARL14EPQ8N8R7 260 aaPredicted RBP9.81□□□□□ -0.84
YBX3-215ENST00000544504 PJA1Q8NG27 643 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 RSAD2Q8WXG1 361 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 TSC1Q92574 1164 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 E2F7Q96AV8 911 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 TBC1D31Q96DN5 1066 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 CSPG4P5Q96PW8 444 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 KCTD15Q96SI1 283 aaPredicted RBP9.81□□□□□ -0.84
YBX3-215ENST00000544504 FERMT1Q9BQL6 677 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 RNF38Q9H0F5 515 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 SIK2Q9H0K1 926 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 RAB6CQ9H0N0 254 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 GPATCH2LQ9NWQ4 482 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 GDE1Q9NZC3 331 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 TBC1D14Q9P2M4 693 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 EPS15L1Q9UBC2 864 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 PPARGC1AQ9UBK2 798 aaKnown RBP9.81□□□□□ -0.84
YBX3-215ENST00000544504 SH3BP1Q9Y3L3 701 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 CPQQ9Y646 472 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 GPR179Q6PRD1 2367 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 WDFY3Q8IZQ1 3526 aa9.81□□□□□ -0.84
YBX3-215ENST00000544504 DENND4CQ5VZ89 1909 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 ANAPC1Q9H1A4 1944 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 NCAM2O15394 837 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CST8O60676 142 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 LRIG2O94898 1065 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 GLULP15104 373 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 EPHB2P29323 1055 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CORO1AP31146 461 aaKnown RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 CHRNA3P32297 505 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 CHKAP35790 457 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CCR2P41597 374 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 FNTAP49354 379 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 KLF1Q13351 362 aaPredicted RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 TEAD2Q15562 447 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CCNG2Q16589 344 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CA9Q16790 459 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 ADGRF1Q5T601 910 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 KAZNQ674X7 775 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 SLC9A4Q6AI14 798 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 DRICH1Q6PGQ1 229 aaPredicted RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 TMCO3Q6UWJ1 677 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 HTR3DQ70Z44 454 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CHSY1Q86X52 802 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CELF5Q8N6W0 485 aaKnown RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 ZNF557Q8N988 423 aaPredicted RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 SPATA4Q8NEY3 305 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 GRK7Q8WTQ7 553 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 P3H4Q92791 437 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 HAUS1Q96CS2 278 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 OTUB2Q96DC9 234 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 SHDQ96IW2 340 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 MS4A14Q96JA4 679 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CARD6Q9BX69 1037 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 SLC46A2Q9BY10 475 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 ZYG11BQ9C0D3 744 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 EPC1Q9H2F5 836 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 TDP1Q9NUW8 608 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 OBP2AQ9NY56 170 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 CWC15Q9P013 229 aaKnown RBP9.8□□□□□ -0.84
YBX3-215ENST00000544504 STOML2Q9UJZ1 356 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 HS3ST4Q9Y661 456 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 OBSL1O75147 1896 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 DENND4AQ7Z401 1863 aa9.8□□□□□ -0.84
YBX3-215ENST00000544504 IGLV3-10A0A075B6K4 115 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 EFCAB8A8MWE9 144 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 WASH4PA8MWX3 477 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 E9PAM4 449 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 LEFTY2O00292 366 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 MCF2LO15068 1137 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 LAMTOR5O43504 91 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 PHF2O75151 1096 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 MOSPD3O75425 235 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 CD48P09326 243 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 IRF1P10914 325 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 KRT10P13645 584 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 RHOQP17081 205 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 GOT1P17174 413 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 GJA1P17302 382 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 CEBPBP17676 345 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 MX2P20592 715 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 TACR2P21452 398 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 IL4RP24394 825 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 HOXC13P31276 330 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 STARD6P59095 220 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 NTHL1P78549 312 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 DMWDQ09019 674 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 XRCC4Q13426 336 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 AUHQ13825 339 aaKnown RBP9.79□□□□□ -0.84
YBX3-215ENST00000544504 DPYSQ14117 519 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 PAFAH1B3Q15102 231 aaKnown RBP9.79□□□□□ -0.84
YBX3-215ENST00000544504 CYP1B1Q16678 543 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 SLC5A9Q2M3M2 681 aa9.79□□□□□ -0.84
YBX3-215ENST00000544504 GLE1Q53GS7 698 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms