RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 ZBTB16Q05516 673 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 KCNJ12Q14500 433 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CDKN3Q16667 212 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF542PQ5EBM4 170 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ARSHQ5FYA8 562 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 MANEAQ5SRI9 462 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 FYB2Q5VWT5 728 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CLEC18BQ6UXF7 455 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CHST9Q7L1S5 443 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 DPH6Q7L8W6 267 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 KANSL1Q7Z3B3 1105 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 C14orf80Q86SX3 495 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 GPBP1Q86WP2 473 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 NT5DC4Q86YG4 428 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 DENND1CQ8IV53 801 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 MMAAQ8IVH4 418 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ALDH16A1Q8IZ83 802 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 OXR1Q8N573 874 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 IGSF22Q8N9C0 903 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CLEC18CQ8NCF0 446 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 OR4C6Q8NH72 309 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 WDR36Q8NI36 951 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ANKRD36BP1Q96IX9 119 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 APOLD1Q96LR9 279 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 MYOCQ99972 504 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 REEP2Q9BRK0 252 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ELOVL4Q9GZR5 314 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 PABPC3Q9H361 631 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ZNF768Q9H5H4 540 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 TLR8Q9NR97 1041 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 GEMIN8Q9NWZ8 242 aaKnown RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 RBAKQ9NYW8 714 aaPredicted RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 SEL1LQ9UBV2 794 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 SUN2Q9UH99 717 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ATXN7L1Q9ULK2 861 aaPredicted RBP4.99□□□□□ -1.61
LIMS1-214ENST00000542845 CA5BQ9Y2D0 317 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ENTPD2Q9Y5L3 495 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 USP3Q9Y6I4 520 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 RELNP78509 3460 aa4.99□□□□□ -1.61
LIMS1-214ENST00000542845 ATP8B3O60423 1300 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 DOPEY1Q5JWR5 2465 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 A0A1W2PQH9 124 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CDRT15L2A8MXV6 281 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CASC3O15234 703 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 MTSS1O43312 755 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 JAK2O60674 1132 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NEBLO76041 1014 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 STC2O76061 302 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 KIF20AO95235 890 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 PENKP01210 267 aaPredicted RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 KLKB1P03952 638 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CKMT1AP12532 417 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 RARGP13631 454 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 TNFRSF8P28908 595 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CORO1AP31146 461 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SLC8A1P32418 973 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CASRP41180 1078 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 TUBP50607 506 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SLC12A3P55017 1021 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 MLLT10P55197 1068 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 MAP3K7CLP57077 242 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 ST8SIA6P61647 398 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 TNNC1P63316 161 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 RELBQ01201 579 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NNTQ13423 1086 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 DRAP1Q14919 205 aaPredicted RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 EIF4HQ15056 248 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 POSTNQ15063 836 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 IL17AQ16552 155 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 WDR72Q3MJ13 1102 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SNX30Q5VWJ9 437 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 ALG1LQ6GMV1 187 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 NAPEPLDQ6IQ20 393 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 DTHD1Q6ZMT9 781 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 RBM44Q6ZP01 1051 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 EFL1Q7Z2Z2 1120 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 PRPF39Q86UA1 669 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SYCP3Q8IZU3 236 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 C4orf32Q8N8J7 132 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 B3GALNT2Q8NCR0 500 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 OR2T34Q8NGX1 318 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SPATA20Q8TB22 786 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 JPH3Q8WXH2 748 aaPredicted RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 GOLGA1Q92805 767 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 KLK6Q92876 244 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 IFT43Q96FT9 208 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 KLHDC7BQ96G42 594 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 MMTAG2Q9BU76 263 aaKnown RBP4.98□□□□□ -1.61
LIMS1-214ENST00000542845 CALN1Q9BXU9 219 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 PHACTR1Q9C0D0 580 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 TMEM245Q9H330 911 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 ERVMER34-1Q9H9K5 563 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 PARVGQ9HBI0 331 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 EPB41L5Q9HCM4 733 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 ABCB8Q9NUT2 735 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 OSER1Q9NX31 292 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 TBC1D7Q9P0N9 293 aa4.98□□□□□ -1.61
LIMS1-214ENST00000542845 SEPT10Q9P0V9 454 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms