RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	MARVELD2	Q8N4S9	558 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SPATA33	Q96N06	139 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	SERPINI1	Q99574	410 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	EPB41L1	Q9H4G0	881 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	TCF7L2	Q9NQB0	619 aa		13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	EIF2B3	Q9NR50	452 aa	Known RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	G3BP2	Q9UN86	482 aa	Known RBP	13.24	□□□□□ -0.29
DDX11-223	ENST00000542838	MFSD11	O43934	449 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	F7	P08709	466 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	CD1E	P15812	388 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SPR	P35270	261 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	CELF3	Q5SZQ8	465 aa	Known RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	C7orf31	Q8N865	590 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	DGCR14	Q96DF8	476 aa	Known RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	KIF12	Q96FN5	646 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	P2RY11	Q96G91	374 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	HIC2	Q96JB3	615 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	PPP1R36	Q96LQ0	422 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	LRGUK	Q96M69	825 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	LPIN3	Q9BQK8	851 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838		Q9H521	79 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	STK39	Q9UEW8	545 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SNX9	Q9Y5X1	595 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	DENR	O43583	198 aa	Known RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	FBXO21	O94952	628 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	THRA	P10827	490 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	LCP1	P13796	627 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	CCDC130	P13994	396 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	PIK3R1	P27986	724 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SERPINB8	P50452	374 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SOWAHA	Q2M3V2	549 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SPANXN3	Q5MJ09	141 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	METTL21C	Q5VZV1	264 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	ZDHHC17	Q8IUH5	632 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	CCNY	Q8ND76	341 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	AFG1L	Q8WV93	481 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	SREK1	Q8WXA9	508 aa	Known RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	CENPI	Q92674	756 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	FCRL3	Q96P31	734 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	ATXN10	Q9UBB4	475 aa		13.23	□□□□□ -0.29
DDX11-223	ENST00000542838	KPNA7	A9QM74	516 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	NEMP1	O14524	444 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	HBP1	O60381	514 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	DNAJA2	O60884	412 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	CLPTM1	O96005	669 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	GLDC	P23378	1020 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	GTF2A2	P52657	109 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	MRPS22	P82650	360 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	OLIG2	Q13516	323 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	AMHR2	Q16671	573 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	C16orf89	Q6UX73	402 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	LBX2	Q6XYB7	198 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	STRA8	Q7Z7C7	330 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	SNX32	Q86XE0	403 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RBBP8	Q99708	897 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	PRPF19	Q9UMS4	504 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	LZTS1	Q9Y250	596 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	USP3	Q9Y6I4	520 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838		A0A096LPK6	155 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	CCDC160	A6NGH7	325 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	TMEM114	B3SHH9	223 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838		G3V2L1	256 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	ATP9B	O43861	1147 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	STAU1	O95793	577 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	ARF4	P18085	180 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RGS2	P41220	211 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	ABCG1	P45844	678 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RPL5	P46777	297 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	IRF9	Q00978	393 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	IFRD2	Q12894	506 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	PPM1L	Q5SGD2	360 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RARS2	Q5T160	578 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RBM44	Q6ZP01	1051 aa	Known RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	FAM131B	Q86XD5	332 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	RIOX2	Q8IUF8	465 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	FAM81A	Q8TBF8	368 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	COPS5	Q92905	334 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	ZNF669	Q96BR6	464 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	CDRT15	Q96T59	188 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	FERMT1	Q9BQL6	677 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	WDR55	Q9H6Y2	383 aa	Predicted RBP	13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	CAB39L	Q9H9S4	337 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	UBAP1	Q9NZ09	502 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	ADAM28	Q9UKQ2	775 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	CIT	O14578	2027 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	SCN1A	P35498	2009 aa		13.22	□□□□□ -0.29
DDX11-223	ENST00000542838	TRIM13	O60858	407 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	GMPS	P49915	693 aa	Predicted RBP	13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	FLOT2	Q14254	428 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	DLG2	Q15700	870 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	FAM187B	Q17R55	369 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	FSTL4	Q6MZW2	842 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	SLC26A9	Q7LBE3	791 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	DSEL	Q8IZU8	1212 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	KY	Q8NBH2	561 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	OR52K1	Q8NGK4	314 aa		13.21	□□□□□ -0.29
DDX11-223	ENST00000542838	CNBD2	Q96M20	576 aa		13.21	□□□□□ -0.29

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