RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 TRIAP1O43715 76 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ERN1O75460 977 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 IPO13O94829 963 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 METTL18O95568 372 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 BAG2O95816 211 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 EIF2S1P05198 315 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 HNRNPCP07910 306 aaKnown RBP eCLIP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 RARGP13631 454 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 INSRRP14616 1297 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CDH2P19022 906 aaPredicted RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 FGFR4P22455 802 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CPA2P48052 419 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 RAC3P60763 192 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 HSD11B2P80365 405 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 PPARDQ03181 441 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TLE3Q04726 772 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM115Q12893 351 aaPredicted RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 AIMP1Q12904 312 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 AIMP2Q13155 320 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KCNJ12Q14500 433 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CRYMQ14894 314 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ASIC2Q16515 512 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KYNUQ16719 465 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ST3GAL2Q16842 350 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 LY6KQ17RY6 165 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC9B1Q4ZJI4 515 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 METTL24Q5JXM2 366 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 NT5DC1Q5TFE4 455 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 SLC9A4Q6AI14 798 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 GRHL2Q6ISB3 625 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TMEM154Q6P9G4 183 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KLHL35Q6PF15 583 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 MTHFD1LQ6UB35 978 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 IL27RAQ6UWB1 636 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 C16orf89Q6UX73 402 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KIAA1324Q6UXG2 1013 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CLNKQ7Z7G1 428 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 SYT12Q8IV01 421 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 P3H2Q8IVL5 708 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ADGRF2Q8IZF7 708 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 FAM109AQ8N4B1 249 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 OR56A1Q8NGH5 318 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CLEC4CQ8WTT0 213 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ATG4AQ8WYN0 398 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KLHL29Q96CT2 875 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 MBD6Q96DN6 1003 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 LCORQ96JN0 433 aaPredicted RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 CDHR1Q96JP9 859 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 NEU1Q99519 415 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 DPYSL5Q9BPU6 564 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 KAT14Q9H8E8 782 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 MSL2Q9HCI7 577 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 TRIM36Q9NQ86 728 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 RXFP3Q9NSD7 469 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 THAP1Q9NVV9 213 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 MRPL15Q9P015 296 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 NKX1-2Q9UD57 310 aaPredicted RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 SLCO3A1Q9UIG8 710 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 ISY1Q9ULR0 285 aaKnown RBP4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 FRMPD1Q5SYB0 1578 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 PREX1Q8TCU6 1659 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 SPATA31A3Q5VYP0 1347 aa4.21□□□□□ -1.74
SFSWAP-211ENST00000542813 PRAMEF33A0A0G2JMD5 474 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 TEX13CA0A0J9YWL9 993 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 A0A1B0GTW7 788 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 C16orf96A6NNT2 1141 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ZAR1LA6NP61 321 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 A8MV72 311 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 GCOM1H8Y6P7 765 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 BCAT2O15382 392 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CDC14BO60729 498 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PRAMEF10O60809 474 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 HNRNPCL1O60812 293 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 ENTPD3O75355 529 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MTA2O94776 668 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CSPG5O95196 566 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PDE8BO95263 885 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 VNN1O95497 513 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 AFPP02771 609 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CFIP05156 583 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CYP3A4P08684 503 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 QDPRP09417 244 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MMP8P22894 467 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MSX2P35548 267 aaPredicted RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 DEKP35659 375 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PBX3P40426 434 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 MSH2P43246 934 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PPP5CP53041 499 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 RAD23AP54725 363 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 FOXL2P58012 376 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 TAS2R50P59544 299 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 UBXN2AP68543 259 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 OLR1P78380 273 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 CDK18Q07002 472 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 GOLGA8DPQ0D2H9 430 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 EIF2B5Q13144 721 aaKnown RBP4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 PPP2R5CQ13362 524 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 DYRK1AQ13627 763 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 IRF3Q14653 427 aa4.2□□□□□ -1.74
SFSWAP-211ENST00000542813 HLXQ14774 488 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms