RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ELOVL2Q9NXB9 296 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 PLA2G4CQ9UP65 541 aa19.33■□□□□ 0.68
VPS33A-205ENST00000541169 PJA2O43164 708 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 LRIG2O94898 1065 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 POLR2EP19388 210 aaKnown RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 OR1E1P30953 314 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 NOP2P46087 812 aaKnown RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 SEMA3BQ13214 749 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 RAB6CQ53S08 254 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 EOGTQ5NDL2 527 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 LRRC38Q5VT99 294 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 SYT13Q7L8C5 426 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 C1orf210Q8IVY1 113 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 MAP7D3Q8IWC1 876 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 ZNF513Q8N8E2 541 aaPredicted RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 TTC17Q96AE7 1141 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 TSGA10Q9BZW7 698 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 RAB6CQ9H0N0 254 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 SPATA6Q9NWH7 488 aaPredicted RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 RCOR3Q9P2K3 495 aaPredicted RBP19.32■□□□□ 0.68
VPS33A-205ENST00000541169 PCSK1NQ9UHG2 260 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 FBXO4Q9UKT5 387 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 DOCK4Q8N1I0 1966 aa19.32■□□□□ 0.68
VPS33A-205ENST00000541169 KMT2EQ8IZD2 1858 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 ILVBLA1L0T0 632 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 LAMTOR5O43504 91 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 EPHB2P29323 1055 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 HOXA6P31267 233 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 ARL4AP40617 200 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 CXCL12P48061 93 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 DPYSL2Q16555 572 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 NAIF1Q69YI7 327 aaPredicted RBP19.31■□□□□ 0.68
VPS33A-205ENST00000541169 RWDD4Q6NW29 188 aaKnown RBP19.31■□□□□ 0.68
VPS33A-205ENST00000541169 C14orf80Q86SX3 495 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 P2RY11Q96G91 374 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 LMLNQ96KR4 655 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 SNRNP25Q9BV90 132 aaKnown RBP19.31■□□□□ 0.68
VPS33A-205ENST00000541169 FAM126AQ9BYI3 521 aaPredicted RBP19.31■□□□□ 0.68
VPS33A-205ENST00000541169 DHX35Q9H5Z1 703 aaKnown RBP19.31■□□□□ 0.68
VPS33A-205ENST00000541169 TMPRSS4Q9NRS4 437 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 TMEM248Q9NWD8 314 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 CLEC4EQ9ULY5 219 aa19.31■□□□□ 0.68
VPS33A-205ENST00000541169 WASH4PA8MWX3 477 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 PRRT4C9JH25 899 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 GALR2O43603 387 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 SRPRAP08240 638 aaKnown RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 DLDP09622 509 aaKnown RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 NTSR1P30989 418 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 NNMTP40261 264 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 SSR1P43307 286 aaKnown RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 VASPP50552 380 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 NRLP54845 237 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 TPI1P60174 286 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 SLC25A11Q02978 314 aaKnown RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 LMAN2Q12907 356 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 MTAPQ13126 283 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 MESDQ14696 234 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 PDK2Q15119 407 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 GEN1Q17RS7 908 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 PLEKHG6Q3KR16 790 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 MBLAC2Q68D91 279 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 C11orf63Q6NUN7 778 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 ADIPOR2Q86V24 386 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 VSIG1Q86XK7 387 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 CAMKK1Q8N5S9 505 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 RPLP0P6Q8NHW5 317 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 EZH1Q92800 747 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 MYEOVQ96EZ4 313 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 BTBD6Q96KE9 485 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 FEM1AQ9BSK4 669 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 C2orf49Q9BVC5 232 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 CIPCQ9C0C6 399 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 PRDM16Q9HAZ2 1276 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 RBM12Q9NTZ6 932 aaKnown RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 THAP10Q9P2Z0 257 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-205ENST00000541169 MMP17Q9ULZ9 603 aa19.3■□□□□ 0.68
VPS33A-205ENST00000541169 H3BRJ5 948 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 EEF2KO00418 725 aaKnown RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ZBTB24O43167 697 aaPredicted RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 DAPK3O43293 454 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 KRT86O43790 486 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 CREB3O43889 395 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 RHOCP08134 193 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 CD70P32970 193 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 DGKEP52429 567 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 YBEYP58557 167 aaPredicted RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ST8SIA6P61647 398 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ZNF528Q3MIS6 628 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 ALFQ53S48 1182 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 C2orf27AQ580R0 203 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 PITRM1Q5JRX3 1037 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 CXorf57Q6NSI4 855 aaKnown RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 CYP4V2Q6ZWL3 525 aaPredicted RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 RNF10Q8N5U6 811 aaKnown RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 LZTR1Q8N653 840 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 RTL3Q8N8U3 475 aaKnown RBP19.29■□□□□ 0.68
VPS33A-205ENST00000541169 IL17RCQ8NAC3 791 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 PDLIM2Q96JY6 352 aa19.29■□□□□ 0.68
VPS33A-205ENST00000541169 PEBP4Q96S96 227 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms