RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 FAM72AQ5TYM5 149 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 KCTD11Q693B1 232 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 NAPEPLDQ6IQ20 393 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 FAM72DQ6L9T8 149 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 KIAA1841Q6NSI8 718 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 RGS9BPQ6ZS82 235 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 B4GALNT4Q76KP1 1039 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZNF771Q7L3S4 317 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 EXOC3L1Q86VI1 746 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 CAND1Q86VP6 1230 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 NLRP14Q86W24 1093 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 LRRC6Q86X45 466 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 FAM72BQ86X60 149 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 CEP57Q86XR8 500 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TCEAL8Q8IYN2 117 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZNF683Q8IZ20 524 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZNF567Q8N184 647 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ATPAF2Q8N5M1 289 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 CCNYQ8ND76 341 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 CCDC110Q8TBZ0 833 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ATXN2LQ8WWM7 1075 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TMEM169Q96HH4 297 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 SIGLEC10Q96LC7 697 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 TEKT5Q96M29 485 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 XPO6Q96QU8 1125 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 IL12RB2Q99665 862 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PLCD4Q9BRC7 762 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 ZYG11BQ9C0D3 744 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 NSRP1Q9H0G5 558 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 LRRC40Q9H9A6 602 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 PRDM5Q9NQX1 630 aaPredicted RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 NSMCE4AQ9NXX6 385 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 SPG21Q9NZD8 308 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 IKBKGQ9Y6K9 419 aa8.52□□□□□ -1.05
C2CD3-215ENST00000540452 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
C2CD3-215ENST00000540452 SYNJ2BP-COX16A0A087WUM0 186 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 TCRBV7S3A2A0A539 114 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 TCRBV9S1A1TA0A576 114 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 WDR27A2RRH5 827 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 GMNCA6NCL1 334 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 FAM47DPA6NHR8 397 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ARHGAP42A6NI28 874 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 FAM159BA6NKW6 160 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 SOBPA7XYQ1 873 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 RASA4BC9J798 803 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MATN3O15232 486 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 RASA4O43374 803 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MAFKO60675 156 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 KRT37O76014 449 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 KRT38O76015 456 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 VNN2O95498 520 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 METTL18O95568 372 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 CPP00450 1065 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 INHBAP08476 426 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 OR4Q2P0C623 313 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 PGAM1P18669 254 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 GCAP28676 217 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ATP5C1P36542 298 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ELK3P41970 407 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MSH2P43246 934 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 WDR5P61964 334 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 IFRD2Q12894 506 aaPredicted RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 FASTKD3Q14CZ7 662 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 VEPH1Q14D04 833 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 DDR2Q16832 855 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 TCTN1Q2MV58 587 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MGAT5BQ3V5L5 792 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MSS51Q4VC12 460 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 PABPC1LQ4VXU2 614 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 SPANXN3Q5MJ09 141 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ARTNQ5T4W7 220 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 TIFABQ6ZNK6 161 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ZNF534Q76KX8 674 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 YTHDF3Q7Z739 585 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 PRUNE1Q86TP1 453 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ITIH5Q86UX2 942 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 SLC26A11Q86WA9 606 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ARHGAP12Q8IWW6 846 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ATAD1Q8NBU5 361 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ZSCAN18Q8TBC5 510 aaPredicted RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 BCAS4Q8TDM0 211 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ACMSDQ8TDX5 336 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 CDKL2Q92772 493 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 GRAMD1AQ96CP6 724 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 VWCEQ96DN2 955 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 STAMBPL1Q96FJ0 436 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 ZNF599Q96NL3 588 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 FCRL5Q96RD9 977 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 SMC6Q96SB8 1091 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 PAFAH2Q99487 392 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 LGMNQ99538 433 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 DDX50Q9BQ39 737 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 WDR83Q9BRX9 315 aaKnown RBP8.51□□□□□ -1.05
C2CD3-215ENST00000540452 PPP1R12CQ9BZL4 782 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 IL22Q9GZX6 179 aa8.51□□□□□ -1.05
C2CD3-215ENST00000540452 NMUR1Q9HB89 426 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms