RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 ADH1BP00325 375 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 APOEP02649 317 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 GOT1P17174 413 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 C5AR1P21730 350 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 CD38P28907 300 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 SLC8A1P32418 973 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 CCR5P51681 352 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 ECT2LQ008S8 904 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 SLC12A1Q13621 1099 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 DCAF6Q58WW2 860 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 FSCBQ5H9T9 825 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 RNF219Q5W0B1 726 aaPredicted RBP12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 RRAGAQ7L523 313 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 TAC4Q86UU9 113 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 TMPRSS12Q86WS5 348 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 MMAAQ8IVH4 418 aaKnown RBP12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 SCUBE3Q8IX30 993 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 MYEOVQ96EZ4 313 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 BTN2A3PQ96KV6 586 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 ST7Q9NRC1 585 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 TJP2Q9UDY2 1190 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 NAALADL1Q9UQQ1 740 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 CABIN1Q9Y6J0 2220 aa12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 ANKRD11Q6UB99 2663 aaPredicted RBP12.42□□□□□ -0.42
CBX3P4-202ENST00000540428 A0A087WV48 116 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 A0A1W2PR77 199 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 BICDL2A1A5D9 508 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 TTC34A8MYJ7 566 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 CAPN9O14815 690 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 MED7O43513 233 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 GNA14O95837 355 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 IGLV3-25P01717 112 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 C1SP09871 688 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 TACR2P21452 398 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 NNMTP40261 264 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 SULT2A1Q06520 285 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 CYP4F3Q08477 520 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 EIF4EBP2Q13542 120 aaPredicted RBP12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 ELAVL3Q14576 367 aaKnown RBP12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 SLC45A4Q5BKX6 768 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 TTC39BQ5VTQ0 682 aaPredicted RBP12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 TTI2Q6NXR4 508 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 MMS22LQ6ZRQ5 1243 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 TRIM59Q8IWR1 403 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 LGI2Q8N0V4 545 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 CFAP52Q8N1V2 620 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 OXR1Q8N573 874 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 KNL1Q8NG31 2342 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 FAM131CQ96AQ9 280 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 MED15Q96RN5 788 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 FAM129BQ96TA1 746 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 SLC4A5Q9BY07 1137 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 EBF2Q9HAK2 575 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 POPDC2Q9HBU9 364 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 GDF3Q9NR23 364 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 BAHCC1Q9P281 2608 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 ADAMTS20P59510 1910 aa12.41□□□□□ -0.42
CBX3P4-202ENST00000540428 F5H5T6 163 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ENC1O14682 589 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 LATO43561 262 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 LDOC1O95751 146 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 TRUB2O95900 331 aaKnown RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 MOCS2O96007 188 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 WNT1P04628 370 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ITGAVP06756 1048 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 MZF1P28698 734 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 NUDT1P36639 197 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 CTSOP43234 321 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ARRB1P49407 418 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 VASPP50552 380 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 PLK1P53350 603 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ADPRHP54922 357 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 OXCT1P55809 520 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 MARSP56192 900 aaKnown RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 YWHAZP63104 245 aaKnown RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 NUCB2P80303 420 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 IL9RQ01113 521 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 KCNH2Q12809 1159 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 KCNJ12Q14500 433 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 SOWAHCQ53LP3 525 aaPredicted RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ZC3H12AQ5D1E8 599 aaKnown RBP12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 SYPL2Q5VXT5 272 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 RAP1GAP2Q684P5 730 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 DHRS13Q6UX07 377 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 TMEM110Q86TL2 294 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 CHSY1Q86X52 802 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 STK40Q8N2I9 435 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 AADATQ8N5Z0 425 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ATP6V0D2Q8N8Y2 350 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 ADAM32Q8TC27 787 aa12.4□□□□□ -0.42
CBX3P4-202ENST00000540428 SAP25Q8TEE9 199 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms