RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ENPEPQ07075 957 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 OVGP1Q12889 678 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 KMT5BQ4FZB7 885 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 FAM133BQ5BKY9 247 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 NAPEPLDQ6IQ20 393 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 INTS8Q75QN2 995 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 PRPF39Q86UA1 669 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 UNC45BQ8IWX7 931 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 AZIN2Q96A70 460 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 ZNF396Q96N95 335 aaPredicted RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 IPO9Q96P70 1041 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 SEMA4CQ9C0C4 833 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 UPF2Q9HAU5 1272 aaKnown RBP12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 STIM2Q9P246 746 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 ARHGAP20Q9P2F6 1191 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 TRAF3IP3Q9Y228 551 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 PCDHB1Q9Y5F3 818 aa12.06□□□□□ -0.48
CLSTN3-209ENST00000539982 TRIM38O00635 465 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ARHGAP6O43182 974 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ACSL4O60488 711 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 DXOO77932 396 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 YEATS4O95619 227 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ADH1BP00325 375 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 IGLV3-27P01718 113 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 TRIM49P0CI25 452 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 TRIM49CP0CI26 452 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 KRT13P13646 458 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 NUDT1P36639 197 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 PSMD8P48556 350 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ERVPABLB-1P60509 514 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ADIGQ0VDE8 80 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 LY6DQ14210 128 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 CDCP2Q5VXM1 449 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 NUGGCQ68CJ6 796 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 SCML4Q8N228 414 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 SLC25A45Q8N413 288 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 HJURPQ8NCD3 748 aaPredicted RBP12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 SNRNP27Q8WVK2 155 aaKnown RBP12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 TTC9Q92623 222 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 DPH1Q9BZG8 443 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 KDM4CQ9H3R0 1056 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 MMRN2Q9H8L6 949 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 TMEM8AQ9HCN3 771 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 EXOC1Q9NV70 894 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 FAM13BQ9NYF5 915 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 SLCO3A1Q9UIG8 710 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 ITIH6Q6UXX5 1313 aa12.05□□□□□ -0.48
CLSTN3-209ENST00000539982 KLK10O43240 276 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 SDC3O75056 442 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 WISP1O95388 367 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 IL1BP01584 269 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 MPOP05164 745 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 GTF2H1P32780 548 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CTSOP43234 321 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 LSSP48449 732 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 PPP2CBP62714 309 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 PPP2CAP67775 309 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 DAB2P98082 770 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 ECT2LQ008S8 904 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 VAC14Q08AM6 782 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 BST2Q10589 180 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 STAT4Q14765 748 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 GOLGA7BQ2TAP0 167 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 HS1BP3Q53T59 392 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 FSCBQ5H9T9 825 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 PITRM1Q5JRX3 1037 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 KRT39Q6A163 491 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 MSANTD2Q6P1R3 559 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CCDC117Q8IWD4 279 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CEP57L1Q8IYX8 460 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 SIX6OS1Q8N1H7 587 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 STK40Q8N2I9 435 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CARNMT1Q8N4J0 409 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 KCNE4Q8WWG9 221 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 KCTD13Q8WZ19 329 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 SEMA4DQ92854 862 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 PTPRN2Q92932 1015 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 TATDN2Q93075 761 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 MED8Q96G25 268 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 DDX50Q9BQ39 737 aaKnown RBP12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CNGB3Q9NQW8 809 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 HESX1Q9UBX0 185 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 CYTH4Q9UIA0 394 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 TSPAN16Q9UKR8 245 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 DMTF1Q9Y222 760 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
CLSTN3-209ENST00000539982 SPTA1P02549 2419 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 TYW5A2RUC4 315 aaKnown RBP12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 PYCARD-AS1I3L0S3 204 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 SLC7A4O43246 635 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 OPA1O60313 960 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 USP12O75317 370 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 MOCS3O95396 460 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 CKMT1AP12532 417 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 DGKAP23743 735 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 NR2F2P24468 414 aa12.03□□□□□ -0.48
CLSTN3-209ENST00000539982 MZF1P28698 734 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms