RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 TLDC2A0PJX2 215 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 BCLAF3A2AJT9 711 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 H3BRJ5 948 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 DCLK1O15075 740 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 TGM5O43548 720 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 RTN3O95197 1032 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 NUDT17P0C025 328 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 ZDHHC11BP0C7U3 371 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 SPATA31D3P0C874 917 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 RARGP13631 454 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 GOT1P17174 413 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 DRD4P21917 467 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 STIP1P31948 543 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 ARL4AP40617 200 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 PGFP49763 221 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 ELF3P78545 371 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 IFRD2Q12894 506 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 MORF4L2Q15014 288 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 PAFAH1B3Q15102 231 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 PPP6R3Q5H9R7 873 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 BRMS1LQ5PSV4 323 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 RNASEH2BQ5TBB1 312 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 LILRA6Q6PI73 481 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 SPATA31D4Q6ZUB0 917 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 CCDC63Q8NA47 563 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 ARNTL2Q8WYA1 636 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 EDEM1Q92611 657 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 QKIQ96PU8 341 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-213ENST00000539332 CCDC134Q9H6E4 229 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 NMUR1Q9HB89 426 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 NOD2Q9HC29 1040 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 ARHGEF38Q9NXL2 777 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 NOP53Q9NZM5 478 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 SLC12A4Q9UP95 1085 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 FARP1Q9Y4F1 1045 aaPredicted RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 YIPF1Q9Y548 306 aa9.11□□□□□ -0.95
DDB1-213ENST00000539332 HELZP42694 1942 aaKnown RBP9.11□□□□□ -0.95
DDB1-213ENST00000539332 SLC38A8A6NNN8 435 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 HACD1B0YJ81 288 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 SGK1O00141 431 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 LPXNO60711 386 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ETS1P14921 441 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 VAMP1P23763 118 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 YWHAQP27348 245 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 HOXC13P31276 330 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 HTR7P34969 479 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ADCY8P40145 1251 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ALDH1A3P47895 512 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 NRG1Q02297 640 aaPredicted RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 SLC10A2Q12908 348 aaPredicted RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 NME3Q13232 169 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 PPP2R5DQ14738 602 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 NAA25Q14CX7 972 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 TRIP13Q15645 432 aaPredicted RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 P3H1Q32P28 736 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 MANEALQ5VSG8 457 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 IZUMO3Q5VZ72 239 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 PDE12Q6L8Q7 609 aaKnown RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 CHRDL2Q6WN34 429 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 GSTA5Q7RTV2 222 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ZNF276Q8N554 614 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ZCCHC9Q8N567 271 aaKnown RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 ARMC2Q8NEN0 867 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ADAM32Q8TC27 787 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 XPO6Q96QU8 1125 aaKnown RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 OSBPL2Q9H1P3 480 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 PABPC3Q9H361 631 aaKnown RBP9.1□□□□□ -0.95
DDB1-213ENST00000539332 TMPRSS4Q9NRS4 437 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ETNK2Q9NVF9 386 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 OSER1Q9NX31 292 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDB1-213ENST00000539332 DTLQ9NZJ0 730 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 SAMD15Q9P1V8 674 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 ANAPC5Q9UJX4 755 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 NEU3Q9UQ49 428 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 INSL5Q9Y5Q6 135 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 RAD54BQ9Y620 910 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 C5orf42Q9H799 3197 aa9.1□□□□□ -0.95
DDB1-213ENST00000539332 A0A1W2PQH9 124 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 FAM72CH0Y354 149 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SMAPO00193 183 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 MFSD11O43934 449 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 RECKO95980 971 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 GLUD1P00367 558 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 ZSCAN5DPP0CG00 497 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 AMPD1P23109 780 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 RPL22P35268 128 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 CHKAP35790 457 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 MAGEA6P43360 314 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 VPS41P49754 854 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 CLCN4P51793 760 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 PMS2P54278 862 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SMAD3P84022 425 aaKnown RBP9.09□□□□□ -0.95
DDB1-213ENST00000539332 GBE1Q04446 702 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 GPS1Q13098 491 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 ARL13BQ3SXY8 428 aa9.09□□□□□ -0.95
DDB1-213ENST00000539332 SLC45A4Q5BKX6 768 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms